Cynoglossus semilaevis (tongue sole): 103388928
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Entry
103388928 CDS
T04866
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04621
NOD-like receptor signaling pathway
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103388928 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103388928 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csem04054
]
103388928 (nod1)
Pattern recognition receptors [BR:
csem04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103388928 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
NOD2_WH
LRR_6
AAA_16
AAA_22
Viral_DNA_bi
RsgA_GTPase
PIF1
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
103388928
NCBI-ProteinID:
XP_008322367
UniProt:
A0A3P8W7A8
LinkDB
All DBs
Position
13:20084844..20092556
Genome browser
AA seq
939 aa
AA seq
DB search
MDQAKKVKCLYLLTCHREMLVSKVRSIQCILDNLLACGFFCEEDVEIVQRTTTKTAQVRK
ILEFVQCKGEEVCEYFLFIIYKVGDAYIDLQPWLKEINFHPSNDVSVMKVVNTDPISRYC
AKLRLEMSRDTSFIMSYGQKEETHLEDLYTDTLMELLNNSNESLGFVESLDQLLGDHAVF
NPQGEIIYVMGDAGVGKSILLQKLQNLWSQKALHTDAIFCFKFRCRMFSIFKESEQISLR
DLLFKYNCHPDYDPDDEVFEYILRFPEKILFTFDGYDEIQEDLDLLNVPEVVSPDHEAHP
LQLLISLLCGKLLKNSQKILTARTGIEIQSKVIRKKVALRGFSPSHLKTYINLHFKEREH
REQVALQLYASPHLCGLCSTPLFCWIVFRTFRHLHTMHDSFHLPETSITLTGIFLLLSES
FFSHSTSTASSLLKKNTRCSTETFKASLKSLFSFAKLAFQGLERGSFICNQEEITACGLT
EEDLTLGFLKPVSEFDANGGSANFEFLHVTLQSFLAAFFLLLDDQSSANSILKFFTECSR
KKEQSCQLFNLCLNDSSNQSEKNPFATNDHLQFTNLFLCGLLSKAHTGLMEHLVSPVLLK
KKRTLLKSYLSTSVKSHLHGLPHYHSDEGNKVHVLPNFLWIVRCVFETGSHDIAYMTAKC
ITANLIKLGYCNIYSGDCTAINFVMQHCQKRLGLDMDNNNISDYGVKQLKPSFCKLTVVR
LSVNLLSDSSIEVLREELCKYKVVEVLGLYNNQITDIGAKLVAQIIEECPKLRIVKIGKN
KITGVGGRYLAAAIQKSASIFDVGMWGNTIGDEGAKAFAEALRNHPNLTNLSLSANGITS
VGGKFLAEALKENSVLRIFWLVQNEMTDDCAPHWAELVKADTGLRHLWLISNQFTVSGIK
DLAEALAHNTALQEICVKGNQLCEEEENKFVSEERLRFH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggccaaaaaggtcaaatgtttatacctgctcacgtgccacagagagatgctg
gtgtccaaggtgaggagcattcagtgtatcctggacaacctgctggcctgtggcttcttc
tgtgaagaagatgttgagattgtacagaggactaccaccaagacagcccaggtgcgtaaa
attctggagtttgtccagtgcaaaggggaagaggtctgtgaatacttcctctttatcata
tataaagtaggagatgcttacatagacctgcagccatggctgaaggagatcaactttcac
ccaagcaatgacgtgtcagtgatgaaagttgtaaacactgatcccatcagcaggtactgt
gcaaagctgagacttgaaatgagccgtgacacttccttcattatgtcctatgggcagaaa
gaggagacccatctggaggatctgtacactgacaccctgatggaactgttgaacaactcc
aacgaaagcctaggatttgtagagagtctggatcagcttcttggagaccatgcagtcttt
aatcctcagggggaaatcatctacgtgatgggagacgctggtgtgggaaagtctatcctt
ctgcagaagctccagaacctctggtcccaaaaagcactgcacacagatgctatcttctgc
tttaagttccgctgcaggatgtttagcatttttaaggaatcagagcagatctccctcaga
gaccttttgtttaaatacaactgccacccagattatgatccagatgatgaggtatttgag
tacattctgcgcttccctgaaaagattctctttacatttgatggctatgatgagatccag
gaggatctggacctgctgaatgtccctgaggtggtatctccagatcatgaggctcatccc
ctccaactgctgatcagtttactctgcgggaaactactcaaaaactcccagaagatcttg
acagctcgaacaggaatcgaaattcagagcaaagtgatcagaaagaaggttgctctacga
gggttttccccatctcatctgaaaacctacattaatctgcacttcaaggagcgggagcac
agagagcaggtggcacttcagctgtatgctagtcctcatctctgtggcctttgctcaacc
ccactcttctgctggattgtcttcaggacgttcaggcacctgcacaccatgcatgatagc
ttccatctgccagagacgtccattaccctgactggtatctttcttctgctgtctgagtca
ttctttagtcactcgacttcaactgcctcatcgttgctaaaaaaaaacaccagatgttcc
acagagacgttcaaagctagcctaaagtctcttttttcatttgccaagcttgcttttcaa
ggtctggagagagggagctttatttgtaaccaggaggagatcactgcctgcggtctcaca
gaggaggacctaactctggggtttctcaaacctgtgagtgagtttgatgccaatggaggt
tctgcaaactttgagtttctccatgttactcttcagtccttcttggcagctttttttctt
ctgttggatgatcagtcttcagcaaactccattttgaagttcttcacagagtgcagcaga
aagaaggaacaatcctgtcaactgtttaacttatgtcttaatgactcctcaaaccagagt
gaaaaaaatccatttgcgaccaatgaccaccttcagttcaccaacctcttcctgtgtgga
cttctgtccaaagctcacactggccttatggaacatctagtatctcctgtgctcctcaag
aaaaaacggaccctgcttaaatcctacttgtctactagtgtgaagtcccacctgcatggt
ctaccacattaccacagcgatgaaggcaacaaagtccatgtgttgcctaattttctgtgg
attgtaaggtgcgtctttgaaactgggagccatgacattgcttatatgacggccaaatgc
atcacagcaaacttaatcaaactaggctactgcaacatctactctggcgactgcacggcc
atcaattttgtgatgcaacactgtcagaagcgcttggggctggacatggacaacaacaac
atcagtgactatggagtgaagcaactgaagccttctttttgtaagctgaccgtggtgaga
ttgtctgtcaatcttctgtcagacagtagcatcgaggtgctaagagaggagctgtgcaaa
tacaaagttgtggaagttttgggtctctacaacaaccaaatcacagacatcggagcaaag
cttgttgctcagatcattgaagagtgcccaaagttgagaattgtcaagattggtaaaaac
aagatcactggtgttggtgggaggtacctggctgctgccattcagaaaagtgcatctata
tttgatgtcgggatgtggggaaacaccattggggatgagggcgcaaaagcctttgcagaa
gctttgaggaaccatccaaatctaaccaacctcagtctctcagccaatggcatcacatct
gtaggtgggaaatttctggcagaagccctgaaagagaacagcgtcctcaggatattctgg
ttggtgcagaatgagatgacagatgattgtgctccacactgggctgaactagtcaaagca
gacactggtttaagacacctctggttaatcagcaaccagttcacagtgagtgggatcaaa
gacctcgccgaggcactcgctcacaacactgcactccaggagatatgtgtgaagggtaac
caactttgtgaggaggaagagaacaagtttgtgtcagaggaacggctacgtttccactga
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