Cynoglossus semilaevis (tongue sole): 103391368
Help
Entry
103391368 CDS
T04866
Symbol
cdh23
Name
(RefSeq) cadherin-23
KO
K06813
cadherin 23
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103391368 (cdh23)
04515 Cell adhesion molecules [BR:
csem04515
]
103391368 (cdh23)
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103391368 (cdh23)
Cell adhesion molecules [BR:
csem04515
]
Cadherins
Major cadherins
103391368 (cdh23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
SusE
Sde0182_C
PepSY
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
103391368
NCBI-ProteinID:
XP_016894875
LinkDB
All DBs
Position
15:complement(17447034..17532891)
Genome browser
AA seq
2753 aa
AA seq
DB search
MMVEGYAVISVNRPLDYEQVPRGMIYLTVLVKDGGTPALNSSVSVTVEVIDENDNPPEFS
KPSYIVKIPENINAGATVILVNATDLDASREFGQASLIYSLEGSSQFRLNSRSGEITTTA
LLDREHKSEYILIVRAVDGGVGPQQKTGIATVNITILDINDNAPMWKDEPYHANVVEKSP
INTDVLSVTALDPDEGVNGTVVYSISPQNPFYTINSNTGKIRTSGVTLDRESTNARDAAL
MRTIVISAVDLGTPPLRASASTTVFVNLLDLNDNDPTFLNLPFVAEVPEGLSIGSSVFRV
QVEDPDEDKNGLITMALQMGMPRLDFYLNTSTGVLTSTAVLDREQIGQYYLRIIAYDAGK
FPRTSTSTLTITVLDVNDETPTFNPRLYNVSLKESVPRDTVVTRLSCTDNDAGLNAELSY
FLTGGNQDGKFSVGFRDGIVRTVVGLDRETQAAYALIVEAIDNGPAGSRRTGTASVFVEV
QDVNDNRPIFLQNSYETSVLESVSQGTSILQVQATDADQGENGHVLYRILTDNSNKLFSI
NRETGLLTRGLRALDRETSSSHVLEVEAYNSDEGSMRSSVRVIIYVNDANDEVPVFTQQQ
YNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALVSGSDRKFEVDVSTGLVTTVDHLD
YETKTTYLMNVSATDQAAPFHRGFCTVYVTLLNELDEAVAFFSAGYEASLRENIATGTEV
VQVQAQSADNLNQLTYRFDPDTSPAALALFKIDSVTGRITVTGLLDRERGDVYTLTVVAD
DGGPKKDSTVKVSITILDENDNSPEFDITSDTSVDVPENTPLGRKVATVLGRDRDAGLNG
LVNFTLVAGNMEDVFKIKTVNHTYGEVFVNAPLDRESVDRYLLKVRASDNGSPPRHTDHS
LTINILDVNDNAPVIESQRGYNVSISENVGGGTSVLRVVATDRDIGSNAMLFYYITAGNQ
DLTFRMDRMTGEMVTRPAPPDRERQQEYRLTVTVEDDGTPPLSTSTTIYVRIVDENDNAP
EFPEEEYVTVLSEGPDTVGATIATVTAIDPDEGLNGTLRYAIAQGNLIQTFHINSISGRI
TAVKELDYEISNGHYALVVTATDQCPNLALRLTSSTTVLVNVIDVNDVTPAFPRAYEGPF
DVTEGQPGPRVWTLKATDQDSGLNGKVEYSITAGDPQNEFMISPVEGELRVRKDIELDRE
TTAFYNITVTARDLGTPSRNSSVVVGVNIRDINDNDPVLLNLPYKTNVSEGSSIHTSVAR
VYARDADSGRNALLTFNITAGNQDGAFYINDTTGVVQVNRRLDRERLAEYRLTITVKDNP
ENPRIARRDSDLLVITVLDENDNRPVFTRTSYRAEIMENSAAGTTVTMLNGPVLAEDQDI
GPNAVVKYRLLGPRVDLFTVEATTGVVLVRQGAKLDREAFQEPRVELFLVAEDIGGLNSS
VPLTVTILDQNDNPPVFSPSSFSIRLPENSPSGVVVTQLSATDADSGSNGWLTYRLESGA
QDRFVVEPLSGAVMVGNNTLDREDRASYRLVVMATDRGTPPLSGTAMLTIILDDVNDSRP
SFKNSVTMISVNESTPPGVVVATLTAEDPDLNPRLEYYIISVEAKDDGNNPVEGLQESFG
IDLHTGAVFVRNPLNRELVATFEIIVSVHDNASEVIDKSGSVPNARLTINVLDVNDNAPR
FRPFGVTNFTEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRGEYVRLEDPSIG
KIVANKTVDFEQIQWLNFTIRAQDHGSPPRIAELPVYLRIVDVNDNNPVFLQPSYQEPVF
ENENLGTTVVRVSAKDADSGLFAVIEYSLVDGEGKFGIIPSTGEIYILSPLDRETKDHYT
LTAVARDNPGSIPSNRRENSVQVLVTVLDINDYRPRFTERVYNTSVFENEPSGTSVITVK
AIDLDEGENGAVLYSMLGAHSDAFILDPIAGLVRSRRLLQSSERFNLTVVATDQGRPPLW
GTADLIISVIDVNDNRPVFVRPANGTIIHISEEQPPGLPVYEVYATDSDEGVNGEVRYSF
LQTGAGNRDWENFHIDPFSGVITTTVKMDREKQALHILIIVARDMGQPVPYETTQPLQVA
LLDIDDNEPVFLKPPRGGMPYQLLKVPEHSPPGTVVGNITRAVDADEGSNAVVYYFIAGG
NSDGNFGLSLDGELKLFKDLDREEIPVYSIVIKATSNKSWTPPRGQRTLQNRALDPASDP
SLLEVHIQLEDINDQKPRFMKAEYTAGVAANAKVGSELIKVVALDNDIGNNSVVQYHIVT
IRYYQSQSNDSEDVGSIFIIGLTDGMIRTYDLFTAYDPGYFSLEILACDYAGHCTTTNVN
IYILRDDQRVKIVFNDIPDFVRENQEDFINLLSNITGATVNLDDIQLHVDKKGRVNYAQT
DMLIHVVNNQTNTILDVERVIQMIDENKEQLRNLFRTYNVVDVQPAVGDKLPDDITTLQL
VIIILAVLLCLAGILFVTMNWHYRRVHQRKLKAIVAGSTGNQGLMDILDMPNTNKYSFEG
ANPVWLDPFCRNLELAAQADHEDDLPENLSEITDLWNSPARTHGTFGREPQAKPEDDSYL
RAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYLRLKKLFAARLVTVSTSQGDLSSVTE
LIQSDLDEDEDERLGMGGGRGTLRFKHKLPVELKGPEGVHVVHGSTGTLLTSDLSSLPED
DQRALARSLEALNADRGLYSERNARTESAKSTPMHRHKDGDTISQSPLEITEL
NT seq
8262 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggagggctatgcagtgatctcagtgaacagacctctggattatgagcaggtt
cccagaggaatgatctacttgactgtattggtcaaagatggagggactccagctctcaac
agcagtgtctctgttacagtggaggtcattgatgaaaatgacaacccaccagagttcagt
aagccatcctacatcgtcaaaatccctgagaacattaacgctggggcaactgtgatcctt
gtaaatgccactgatttggacgcctctcgggagttcggccaggcctcactcatctactcc
ctggagggctcgtctcagttccgtctgaactcgcggtcaggagagataaccaccaccgcc
ctgctggacagagaacataagtcagaatacatcctgatagtgagggctgtggacggaggc
gtcggccctcagcaaaaaactggcattgctacggtcaacataactatcctggacatcaat
gacaacgcccccatgtggaaggatgagccataccatgctaacgtggtggagaagagccca
ataaacactgacgttctatcagtgacagctctggaccctgatgaaggagtgaacgggaca
gtggtctacagcatcagtccacaaaacccattttacaccatcaacagcaacacgggaaag
attcgcaccagtggagtaacactggacagagagagcaccaacgccagggacgcagcactc
atgagaaccattgtcatttctgccgttgaccttggtacacctccactgcgggcatctgca
agtaccacagtgtttgtcaacctgctggatctcaacgacaacgacccaaccttcctcaac
ctgccattcgtggctgaagtgccagagggtctaagcattggatcttcagtttttagggtt
caggttgaagacccagatgaggataagaatggattaatcacaatggcgttacaaatgggc
atgcctcgtctggacttctacctcaacacctccactggagtcctcacttccactgcagtc
ctggatcgtgagcagattggacaatactatctgaggattatagcctatgatgctggaaag
ttcccccgcacgtccacatcgaccctcacgatcacagttctggatgtaaatgatgagaca
cctaccttcaacccccgcctgtacaatgtttccctgaaggagagtgttcccagagacacc
gttgtgacacggctcagctgcactgacaacgacgccggcctcaacgccgaacttagctac
ttcctcacaggtgggaatcaggacggtaaattcagcgtgggcttcagagacggaattgtc
cggactgtggtcggcctggacagagagacccaggcagcttacgctctgattgttgaagct
atagacaatggtccggcaggaagtcgacgaacaggtaccgccagcgtgtttgtcgaggtt
caagacgtgaatgacaacagacccatctttcttcaaaacagctatgagaccagcgtattg
gaaagtgtgtctcagggaaccagcatccttcaggttcaggctacagatgcagaccaagga
gagaacggccatgttctgtacaggatcctgactgacaacagcaacaaattgttcagcata
aacagagagaccgggctgctgaccaggggcctcagggctctggacagagaaaccagcagc
tcccatgtgttggaggtggaagcctacaatagtgatgaaggcagcatgaggagttctgtg
agggtcatcatatacgtgaacgacgcaaacgacgaggtgccagtgttcacccagcagcag
tacaaccgtctgggcctcagggagacggcaggcatcggtacctctgtgatagtggtgagg
gccacagatcctgacactggtgatggcggagccgtcgcctacgcccttgtgtccggctca
gatcgtaagtttgaggtggacgtaagcactggcctggtaaccacggtggaccacctggac
tacgagacaaagaccacctatttgatgaatgtctccgccactgaccaggctgcgcctttc
caccgaggcttctgtacagtttacgtcaccttactgaatgagctggacgaggccgtggcc
ttcttttcggctggatacgaggcttctctgcgtgagaacatcgccacggggacagaggtg
gtgcaggtgcaggcccagtcagccgataacttgaaccagctgacttaccgctttgaccca
gacacctcgcctgcagctctggccctctttaaaattgacagcgtgacgggtcgcatcaca
gtgacaggtctgttggacagggaacggggggacgtgtacaccttgactgtagtagctgat
gatggaggccctaagaaggactccactgtgaaggtttcaattacaattctggatgagaat
gacaacagtccagagtttgacatcacttctgacacatcagtggacgtcccagagaacaca
cccttgggtagaaaagtagcaactgtgctgggaagagacagagatgctggactgaatgga
ctggtcaattttactttggtggcaggaaacatggaggacgtgtttaaaatcaagacagtg
aaccacacttatggggaggtttttgtcaacgctcctctggacagagagtcagtggaccgc
tacctcctgaaggtccgtgctagtgataatggttcaccacccagacatacggatcactcc
ctcaccatcaacatcttggacgttaacgacaacgcccctgtgattgagagccagaggggc
tacaacgtcagcatcagtgagaatgttggaggaggcacatccgtcctacgtgtagtggcc
accgaccgagacatcggctccaacgccatgttgttctattacataaccgctggaaaccag
gacttgacgtttcgcatggaccgcatgacgggggagatggtgacacgccccgctcctcct
gatcgagagcgtcaacaagagtaccgactgacagttactgtagaagatgatgggacgcca
cctctgtcgacgtcaaccaccatctatgtccgcattgtggatgaaaacgataacgctccc
gagtttcctgaggaggagtatgtcacggtgctgagtgaggggccagacacagtgggggcc
accatcgccacggtaacagccatcgacccagacgagggtttaaacggcactttgcgatac
gccattgctcagggcaacctgatccagacctttcacatcaacagcatctcagggagaatt
actgctgtcaaggagctggactacgagatcagcaatggacactatgcactggtggtcaca
gcgacagaccagtgtccaaacctggctctacgtctgacgtccagcacaacagtgctggtg
aatgtcattgatgtgaatgatgtgacgcctgcattccctagagcctacgagggacccttc
gatgtcactgaggggcagccgggacctcgagtctggacactcaaagccactgaccaagat
tctggactgaatggcaaagtagaatacagcatcaccgctggagacccgcagaacgagttc
atgatttctccagtggagggtgaactacgggttagaaaagacatagagctggacagggaa
accacagctttctacaacatcactgtcacagcccgagatctaggaaccccgtctcgcaat
agctcggtggtggtcggggtcaacattcgggacattaatgacaatgacccagtccttctt
aacttgccttacaaaaccaatgtgagtgagggttcctccatacacacctctgtggccaga
gtctatgcacgcgacgcagacagtggacggaatgccctgcttacgtttaacatcactgca
ggaaaccaggacggagccttctacatcaacgacacgacaggtgtggtgcaggtcaacagg
cgactggacagagagcgattggctgagtaccgtctcactatcacagtcaaagacaaccca
gaaaacccccgcatcgctcgcagggattcagacctactggtgataactgttctggatgaa
aatgacaacaggcctgtgttcaccaggaccagctacagggctgaaatcatggagaactct
gcagcaggaacaacagttaccatgttaaatgggccagttttggctgaagaccaagacatt
ggacccaatgctgtagtcaagtatcgcctgctaggccccagagtggacctctttactgtg
gaagctaccactggcgtggtactcgtgcgtcagggggccaaactggaccgtgaggcattt
caggagccccgcgtggagctttttctggtcgctgaggacataggcggattgaacagcagc
gttcccctgacagttaccattctagatcagaatgataatcctcctgtgttcagtccgtcc
agtttcagtattcgtctcccagagaacagtccctcaggagttgtggtgactcagctgtct
gccactgacgcagactctggctctaacggctggctgacgtaccgtctggaaagtggcgct
caggaccgtttcgttgtggagccactttctggtgccgtcatggttggcaacaataccctc
gacagagaagatcgcgcttcctatcgcctggtcgtcatggccacagataggggcacaccc
cccctgtctggcacagccatgctgacaatcatcttggacgatgtaaacgactcacggccc
agcttcaagaactccgtgaccatgataagtgtcaacgagtccacgcctcctggtgttgtg
gtggccacgctgacagctgaggatccagatctgaatccccggctggagtactacatcatc
tcagtggaggcaaaggatgatgggaacaatccagttgaagggctgcaggagtcctttggc
atcgatctacacactggtgcagtgtttgtacggaaccccctgaacagagagctcgtggct
acatttgagattattgtgtctgtacatgacaacgccagcgaagtcattgacaagtcaggg
agtgtcccgaacgcgagactcaccatcaatgtgttggatgtaaatgacaacgctcctcgc
ttccggccatttggtgtgacaaactttacagagaagattctggaaggcgctcagccaggc
acaactctattgtcagtgtcagccgtggacccagataaaggtcccaacggacaagtcatt
taccagctgcttcacctgccacgaggggaatacgtgagactggaggacccatctattggt
aaaatagtagccaataagactgtggattttgagcagatacagtggctgaattttactata
agggcccaggaccatggttctcctcccaggattgctgagctgccagtttacctgcgcatc
gtggatgtgaacgataacaaccccgtcttcctacagccctcataccaggagcctgtgttt
gaaaacgagaacctgggcaccaccgttgttcgcgtcagtgccaaagacgctgattccggc
ctctttgctgtcattgagtacagcctggtagacggagaaggtaaatttggcatcatacct
agcacgggggagatatacattctctctcctcttgacagagagacaaaagaccattacact
ctaactgcagtggctcgtgacaaccctggtagcatccccagcaacagacgagagaactct
gtccaggtcctggtaacggtcctggacatcaacgactatcggccgcgcttcacagagaga
gtgtacaacaccagcgtgtttgagaatgagcccagcggcacatctgtgatcacagtcaaa
gccattgatctggacgaaggagagaacggtgcagttctctactccatgttgggagctcac
tcagatgcctttatcctggacccaatcgctggactggtccggtctcgccgtctgcttcag
tcttctgagcgattcaacctgactgtggtggccactgaccaggggcgccccccactgtgg
ggcaccgcagacctgatcatctcagttatagacgtcaatgacaacagacctgtgtttgtc
agaccagctaatggaaccatcatccatatttctgaggagcagcctcctggtctcccagtg
tatgaagtctatgcaacagattctgacgagggtgtgaatggagaggtccgttattccttc
ctacagaccggagcaggaaacagagactgggaaaacttccacatcgatcccttttccgga
gtcattacgacaacagtaaaaatggacagagaaaaacaggcccttcatatccttattatt
gttgcccgtgacatgggccaaccagtgccttatgagaccacgcagcctctgcaggtggcg
ctgttggacattgacgacaatgaacctgtcttccttaaaccaccgcgaggcggcatgcct
taccaactgttgaaggtgcctgagcactctcctccagggacagtggtggggaacataacc
agagcggtggacgctgatgagggctctaatgctgtggtgtactacttcatcgcaggagga
aacagcgacggcaactttggcttgagtctagacggagagttgaagttgtttaaggatctg
gacagggaggagatcccggtctactccatcgtgatcaaggctaccagcaacaaaagctgg
actcctcccaggggtcagaggacattacagaatagagcacttgaccctgccagtgacccc
agcctgctagaagtccacattcaactggaagacatcaatgaccagaaaccacgcttcatg
aaggcagagtacactgcaggcgtagcagcaaatgccaaagtgggttcagagttgatcaag
gttgtagctctggacaatgacattggaaacaacagtgtggtgcagtaccacattgttaca
atacgatactaccagtcacagagcaatgacagtgaggatgttggcagcatctttattatt
ggtttgaccgacggcatgatcagaacctacgaccttttcacagcctacgatcctggctac
ttttcactggagattttggcctgcgattatgccggacactgcacaaccaccaacgtgaac
atatacattctccgcgatgaccaaagagtcaagatcgtctttaatgatattcccgatttt
gtccgtgagaatcaggaagatttcatcaacttgctgtccaacatcacaggagcgacggtc
aacttagacgacattcaattacatgtggacaagaaaggcagggtgaattatgctcagact
gacatgttgatccacgtggtcaacaatcagaccaacactattctagatgtcgaaagagta
attcagatgatcgacgagaacaaggagcagctgagaaacctgttcagaacatacaacgtg
gtggatgttcagcctgccgtaggtgataagctacctgatgacatcaccacactacagctg
gtgatcatcatcctagccgtgttgctgtgcttggcaggaattctgtttgtgacaatgaac
tggcattaccgtagagtacaccagaggaaactcaaagccattgttgcaggatcgacaggg
aaccagggtctgatggacatcctagacatgcccaacactaacaagtactctttcgaggga
gcaaacccagtgtggttggatccattctgtcgcaacctggagctggccgcccaggctgac
catgaagatgacctgccggagaacctgagtgagataactgacttgtggaacagcccagca
cggactcatggaacatttggtcgagagcctcaggccaagccagaggatgatagctacctg
cgggcagccattcaagagtatgacaacattgctaaacttggccaaatcatgagggagggc
cccatcaagggctccctgctgaaggtggtcctggatgattacctgaggctgaaaaagctc
tttgcagctcggctcgtcactgtgtccaccagtcagggagatctctcgtcagttacggag
ctcatccagagcgacctcgacgaagatgaggacgaacggctgggtatgggtggtggccgc
ggtactttgcgctttaagcacaaacttcctgtggaacttaagggccctgaaggtgtccac
gtggtgcacggcagcacaggtaccctcctgacgtcagatctcagcagcctgccggaggat
gaccagcgggctctggcacgttctctggaggcactgaatgctgacagggggctttacagc
gagcgaaatgcccgcacagaatccgccaagtccaccccgatgcaccgccacaaggacgga
gacacgatctcgcagagtcccctggagatcacggagttatga
DBGET
integrated database retrieval system