Campylobacter subantarcticus LMG 24377: CSUB8523_0165
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Entry
CSUB8523_0165 CDS
T03572
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csf03032
]
CSUB8523_0165 (topA)
03400 DNA repair and recombination proteins [BR:
csf03400
]
CSUB8523_0165 (topA)
Enzymes [BR:
csf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CSUB8523_0165 (topA)
DNA replication proteins [BR:
csf03032
]
Prokaryotic type
DNA Topoisomerases
CSUB8523_0165 (topA)
DNA repair and recombination proteins [BR:
csf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CSUB8523_0165 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-C4_Topoisom
Toprim_4
DUF1272
Toprim_2
Lar_restr_allev
DUF3653
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AJC91735
LinkDB
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Position
complement(140612..142474)
Genome browser
AA seq
620 aa
AA seq
DB search
MKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKTSFGIKIEDENFKPEYRISNDH
SNLVKELKEKAKKAKTIYLATDEDREGEAIAYHIAKAINKDESTLPRIVFHEITKSAIEN
ALKNPRSLNINSVNAQQTRRLLDRIVGYKLSPLLNQKIQKGLSAGRVQSAALKIIVDRER
EIKAFIPLKYFSIDMVFEKDLQAELVEFQNQKIEKLSLTNEDRAKLIFNACKNANFKVKN
IESKDRKIAPQAPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVKTHQGIMGVITYMRT
DSLNIAKEALEEVRKLIQNEFGKEYLPSKANIYTTKSKGAQEAHEAIRPTNLSFTPKLAN
EFLEKDEARLYTLIYNRFLASQMNPAISQTQNVYARSSEASFKISGRKILFDGHYKIYGD
MDKDKILPNLKLEDTLNIQTIELNSHFTEPPSRYSEAGLVKKLENLGIGRPSTYAPTISL
LSAREYVYIDKKQIIPNEIAFVVTEVLEQNFSDIVDSDFTSKMEDTLDIIAEGKMDWQEV
LREFYFPFMRKIDEGKRNIKSQKTVTKLDETCPDCGGELAIRKGRYGEFVACLNFPKCKY
SRNLKQETQNEKKARKNSTP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaatcatagtagaatcgcctgccaaagctaaaaccataggtaatttttta
ggtaaagactacgaagtcatcgcctccaaagggcacattagagatctacctaaaactagc
tttggtataaaaatagaagatgaaaacttcaaacccgaatatagaatttcaaacgatcac
tcaaacttggtaaaagaactcaaagaaaaagctaaaaaagctaaaaccatctaccttgca
accgatgaggaccgcgagggagaagccatagcttatcatatagccaaagctattaataaa
gatgaaagcactttgccacgcatagtttttcatgaaatcaccaaaagtgctatcgaaaac
gctttaaaaaacccaagatctttaaacataaacagcgtcaacgcccagcaaactagacgc
ttgcttgatcgtatcgtaggctacaaacttagccccttactcaatcaaaaaattcaaaaa
ggcctaagcgcaggacgtgtgcaaagtgcagctttaaaaatcatcgtcgatagagaaaga
gaaatcaaagcttttattcctttaaaatactttagtattgatatggtttttgaaaaagac
ttacaagcagaactagttgaatttcaaaaccaaaagatagaaaagctaagtctaactaac
gaagacagggcaaaattaatctttaatgcttgtaaaaatgcaaattttaaggtcaaaaac
atagaaagtaaagatagaaaaatagctcctcaagcaccttttatgacctcaacattacag
caaagcgcaagtaatcgtttaggatttaaccctaaaaaaactatgatgatcgctcaaaaa
ctttatgaaggtgtaaaaacgcatcaaggtatcatgggtgtgatcacttatatgagaact
gatagtttaaatatcgcaaaagaagccttagaagaagtaagaaagctcattcaaaatgaa
tttggtaaagaatacctaccaagcaaagcaaatatctataccaccaaaagcaaaggcgcc
caagaagcccatgaagccataagaccaaccaatctaagctttactccaaagcttgcaaat
gaatttttagaaaaagatgaagcaagattatatactttgatctacaatcgttttttggct
tcacaaatgaaccctgccatctctcaaactcaaaatgtgtatgcgagatcaagcgaagca
agttttaaaataagtggtagaaaaattttatttgatggtcattataaaatttatggagat
atggataaagacaaaatcttgcctaatttaaaactagaagatacactaaatatccaaact
atagaactcaactcacactttaccgaaccaccttcaagatactctgaagctggacttgtt
aaaaagctagaaaatcttggtataggacgcccctctacttatgctcccactatctcttta
ctgagtgcaagagagtatgtatatatagataaaaagcaaatcatacctaatgaaatagcc
tttgttgtcacagaagtattagaacaaaattttagcgatatcgtagatagtgattttacc
tccaaaatggaagacacacttgacattattgcagaaggtaagatggattggcaagaagtt
ttacgagaattttattttccttttatgagaaaaatcgatgagggcaagagaaatatcaaa
agccaaaaaacagttaccaagctagatgaaacttgtcctgattgcggtggagaacttgcc
ataagaaaaggaagatatggggaatttgtagcttgtttaaactttccaaaatgcaaatat
tcaagaaatttaaaacaagaaacacaaaatgaaaaaaaagcgagaaaaaactcaacacca
tag
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