Cylindrospermum stagnale: Cylst_4532
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Entry
Cylst_4532 CDS
T02398
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
Organism
csg
Cylindrospermum stagnale
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AFZ26610
UniProt:
K9X1W3
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Position
5144269..5147496
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AA seq
1075 aa
AA seq
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MAILHSSWLLKNQNSCLFVWGETWRSSEVNSESIASRDIPPHPLAMTPVELSEWLHLRHN
KLANFIQQPQVPVSSGRGRKSTSATEKTLPTHSQIIALPTHIPESYESGKTTISPVHSVT
LDVDAKSPQYLHPWRVEGFCLNPSVAIKFLASIPLSAADGEDALLGGDLRYWSQVARWSL
DLISRSKFLPTIQPQTDGSLAAKWQVLLDSAVDATRLEKFAAKMPSACRTYQDSPEYFSS
DLAINLPIQPQELLLGFLNSTIDAQVREMQGFQAPIETKIMASLPSAVRQWLQALTSETN
TVKADAIGVERLEAALKAWTMPLQYQLAGKTLFRTCFQLLSPAYGETNWTLAYFLQAADD
PNFLVDAATIWQNPVEQLVYQNRIIEEPQETFLWGLGLASRLYPAISHSLETESPQSFHL
TPIQAYEFIKSVAWRFEDSGLGVILPPSLANREGWANRLGLKIAVETPKQKQGRLGLQSL
LNFQWQLAIGGQTISKTEFDRLVKLNSPLVEINGEWVELRPQDIKTAQAFFASRKDQMAL
SLEDALRISNGDTQVIEKLPVVSFEASGALQELIGALTNNQSIEPLPTPASFQGQLRPYQ
ERGAAWLAFLERWGLGACLADDMGLGKTIQFIAFLLHLKEQEALENPTLLVCPTSVLGNW
EREVKKFAPTLKVLQYHGDKRPKGKTFAETAKKYDLVITSYSLIHRDIKSLQSITWQAVV
LDEAQNVKNSEAKQSQAVRQLETTFRVALTGTPVENRLQELWSILDFINPGYLGNRQFFQ
RRFAMPIEKYGDVASLNQLRSLVQPFILRRLKTDRAIIQDLPEKQEMTVFCGLSAEQATL
YQQLVEESLSEIDSAAGLQRRGMILALLVKLKQICNHPSQYLKITTLEQHHSAKLQRLEE
MLDVALAEGDRALIFTQFAEWGKLLKPHLEKQLGREILFLYGSTSKKQREEMIDRFQHDP
QGPPIMILSLKAGGVGLNLTRANHVFHFDRWWNPAVENQATDRVFRIGQTRNVQVHKFVC
TGTLEEKIHDMIESKKQLAEQVVGAGEDWLTEMDTDQLRNLLLLDRSAVIDEDAE
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacacagtagttggttactaaaaaatcaaaatagttgtttatttgtgtgg
ggagaaacttggcgatcttctgaggtaaattctgagtcgattgcgtccagagatatacca
ccacatcccttggcaatgacgccagttgaattgagtgaatggttgcacttacgtcacaat
aaacttgctaacttcatccaacaaccccaagttcctgtaagtagcgggagaggacgcaaa
agtacaagtgctacagaaaaaaccttgccgacacactcccaaataattgccctcccaact
catatcccagaaagctatgaatccgggaaaacaacaatttccccagtgcattctgtcacc
ttagatgttgatgcaaaatccccacaataccttcacccgtggcgagtagagggcttttgt
ctcaaccccagcgtagcaataaaatttctcgcttctattcccctgagtgcagctgacggc
gaagacgcccttttgggaggagatttgcgctattggtcgcaggttgcccgctggagttta
gacttaatttcacggtctaaatttttaccaaccatccagccgcaaacagatggttctcta
gctgctaaatggcaagtccttctagacagtgctgtagacgctacccggttggaaaaattt
gcggcgaaaatgccatcagcttgtcgcacctatcaagatagtcctgagtatttttcttct
gacttagcaatcaatttgccaatacaacctcaagaattacttttgggctttctcaacagt
acaatagatgcccaagtgcgtgagatgcagggttttcaagccccaatcgaaaccaagata
atggcatctttaccatctgctgtgcggcagtggttgcaagccttaactagtgaaactaac
acagtcaaagcagatgcaattggagtcgaacggctagaagcggcgctgaaagcttggaca
atgccactgcaatatcaactagcgggaaaaactctgtttcgcacctgttttcaactgctt
tctccagcttatggggaaacaaattggacattggcatatttcctccaagcggcagatgat
cctaattttttagtggatgcggcaactatttggcaaaacccggttgagcaacttgtttat
caaaatcgcataattgaagaaccgcaagaaacgtttttgtggggtttggggttagcttct
cgattgtatcccgcgatatcacacagtttagaaaccgaatcgccccaatcttttcacctc
acacccatccaagcttatgagtttatcaaatcagttgcttggaggtttgaagatagcggt
ttaggcgtgattttgcctccgagtctagcgaaccgtgaaggatgggcaaaccgtttgggt
ttgaaaattgccgtcgaaacaccaaagcaaaaacagggacgcttaggattgcaaagtctg
ttgaattttcaatggcaattggcaattggtgggcaaacaatttctaaaaccgagtttgat
cgacttgtaaagctgaatagcccactggtagaaattaacggcgaatgggtggagttgcgt
ccccaagacatcaaaacagcccaagccttttttgcctcccgtaaagaccaaatggcactt
tctttagaagatgccttacgcatcagtaacggcgacactcaggtaattgaaaaattacca
gtagtcagttttgaggcatccggggcattgcaagaattaattggggcgctaactaataat
cagtccattgaacctttacccacccccgccagtttccaggggcagttacgaccttatcaa
gaaaggggtgcagcttggctagctttcctagaacgttggggattaggtgcttgtctcgct
gacgatatgggtttaggaaaaaccatccagttcatcgcctttctcctacacctaaaagaa
caagaagcactggaaaacccaactttgttagtttgtcccacttctgttttaggtaactgg
gaaagggaagtaaagaaattcgcccccacactcaaagttttacaatatcacggtgataaa
cgccccaaaggtaagacgtttgcagaaacagccaaaaagtacgatttagtaattactagc
tactcactgattcaccgggatattaaatcattacagagcattacttggcaagcagttgta
ttagatgaagcccaaaatgtcaaaaattcagaagcgaagcagtcccaggcagtccgacaa
ttagaaactacatttcgcgtagcattgacgggaacaccagtagaaaacagactacaagaa
ttgtggtctattttagactttatcaatcccggatatttgggcaatcggcagtttttccag
cgtcggtttgccatgccaattgaaaagtatggtgatgtggcttctttaaatcaattacgt
tccttagttcagccgtttattctccggcgcctgaaaaccgaccgcgccatcattcaagac
ttgccagaaaagcaagaaatgacagtattttgcggactcagtgccgaacaagcaacactt
tatcaacaattggtagaagagtctttatccgagatagattcagcagcaggattgcagcgc
cgggggatgattttagctttattagtcaagctaaaacaaatctgcaatcacccgtcccaa
tatttaaaaataaccacattagaacaacatcattcagccaaacttcagcggctagaggaa
atgttagatgtggctttagctgaaggcgatcgcgctttaatttttacccaatttgccgaa
tggggtaagttgctcaaaccccatttagaaaaacaactaggcagagaaatattgttttta
tatggtagcaccagtaaaaaacaacgtgaggaaatgatcgaccgtttccaacatgacccc
caagggccaccaattatgattttgtccctgaaagcaggtggagtcggactaaatttaacc
agagcaaatcatgtattccactttgatagatggtggaaccctgctgtagaaaatcaagcc
acagaccgagtatttcgcattggtcaaacccgcaatgtacaagtgcataaatttgtttgt
actggcactttagaagaaaaaattcatgacatgattgaaagtaaaaaacaactagcagaa
caagttgttggtgcgggtgaagattggctgacggaaatggacacagaccaactccgtaat
ttattactacttgatcgcagcgccgtaattgatgaggatgcagaatga
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