KEGG   Chryseobacterium shandongense: EG350_14785
Entry
EG350_14785       CDS       T05920                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
csha  Chryseobacterium shandongense
Pathway
csha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EG350_14785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csha03019]
    EG350_14785
Enzymes [BR:csha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     EG350_14785
Messenger RNA biogenesis [BR:csha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     EG350_14785
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 MIOX
Other DBs
NCBI-ProteinID: AZA58376
UniProt: A0A3G6MYS8
LinkDB
Position
complement(3307917..3309338)
AA seq 473 aa
MFINLNQNKNLKLFKIISEVAEKNGQSVYIVGGYVRDLLMKRKASTDIDFVTEQSGIELA
RNVGKEIDPKMKVSVFKTYGTAMIKYKDLELEFVGARKESYTEDSRKPEVEGGTIEDDQK
RRDFTINAMAISLNQDNFGELIDPFNGIDDLEKGILRTPLEPAQTYSDDPLRMMRAIRFA
STLQFRIEEKSLEAIKQEAERIKIVSMERIMVEFNKIMLSQKPSVGLRLMEETGLMKLII
PELIDLKGIEEIEGQTHKDNFYHTLEVVDNISENTDNLWLRWAALLHDIGKAPTKKFVEG
TGWTFHGHEFLGSKMVKTLFQRLKLPLGPDMKYVQKMVKLSSRPIALITDDASDSALRRL
LFDAGEDMEDLFTLCKADITTKNSKKQEKFKKNFEYVAVKIKEVEEKDQVRNFQPPISGE
EIMAMFNLKPGREIGILKEKVKEAILEGEIGNDSEEAKQFVIAEGEKLGLTLA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgttcatcaacctaaatcaaaataaaaaccttaaactttttaaaataatttctgaagtc
gcagaaaaaaacggacagtcggtatacattgtaggcggctatgttcgcgatttgctgatg
aaaagaaaagcttctactgatattgattttgtgactgaacagagcggcatcgagctagcc
cggaatgtaggaaaggaaatagaccctaaaatgaaggtttctgttttcaaaacgtacgga
acagccatgataaaatataaagaccttgagcttgaatttgtaggtgccagaaaagaaagt
tatacggaagacagccggaagccggaagtggaaggcggtaccatagaagacgatcagaag
agacgggactttaccatcaatgcaatggctatttctttaaatcaggataattttggtgaa
ttaatcgatcctttcaacgggattgacgacctggaaaaaggaattttgcgaacgccttta
gaaccggctcaaacctattcggatgatccgttgcgtatgatgagagccattcgttttgct
tctactttacaattcaggatcgaagaaaaatccctggaagcaatcaaacaggaagcggaa
cgtatcaaaatcgtttccatggaaagaattatggtagaattcaacaaaatcatgctttcc
caaaaaccttctgtcggtctcagacttatggaagaaacaggcttaatgaaactgattatt
cccgaactaatcgacctgaaaggaatagaagaaatagaagggcagacccacaaggacaac
ttttaccataccttagaagtcgtagacaatatttcagagaatactgacaatctttggctg
cgttgggccgcattgcttcacgatatcggaaaagcgccaaccaaaaaatttgtggaagga
acaggatggacctttcacgggcacgagtttttagggtcaaaaatggtgaaaacattattc
cagagattgaagctgcctttaggcccggacatgaaatatgttcagaaaatggtgaagctt
tcttcccgtcctattgcattgattacagacgatgcttcggattccgcattacgaagattg
ctgttcgatgcaggagaagatatggaagatcttttcaccctttgtaaggcagatattacc
actaaaaactccaaaaagcaggagaaattcaagaagaattttgaatatgtggcagtaaaa
atcaaagaagtggaagaaaaagatcaggtaagaaactttcagccgcccatttcaggagaa
gaaattatggcaatgtttaatttaaaaccaggccgcgagatcggaattttaaaagaaaaa
gtgaaagaagcgatcctggaaggtgaaattggaaatgatagtgaagaagcaaaacaattc
gttattgcagaaggagaaaaactgggcttaacacttgcttaa

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