Cronobacter sakazakii ES15: ES15_2887
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Entry
ES15_2887 CDS
T02119
Symbol
fimD4
Name
(GenBank) fimbrial usher family protein
KO
K07347
outer membrane usher protein
Organism
csk
Cronobacter sakazakii ES15
Pathway
csk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ES15_2887 (fimD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csk02000
]
ES15_2887 (fimD4)
02044 Secretion system [BR:
csk02044
]
ES15_2887 (fimD4)
02035 Bacterial motility proteins [BR:
csk02035
]
ES15_2887 (fimD4)
Transporters [BR:
csk02000
]
Other transporters
Pores ion channels [TC:
1
]
ES15_2887 (fimD4)
Secretion system [BR:
csk02044
]
Chaperone-usher system
Type 1 pilus assembly protein
ES15_2887 (fimD4)
Bacterial motility proteins [BR:
csk02035
]
Pilus system
Fimbrial proteins
ES15_2887 (fimD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AFK00461
LinkDB
All DBs
Position
complement(3107105..3109594)
Genome browser
AA seq
829 aa
AA seq
DB search
MRVARANEYFNPHLLETSETSASALDLNLFSEEQTPAGDYNVDIYINGELVDAGTFTFRY
VDTAENKRLLLPCLTLEQLRQWNIKVENYPDLTKQGETCANLLAIQGVSARLILNQQRFE
LSIAQLAMTHRARGYVPEEKWDDGITAGLLNYSFSGQTTTSRVSDAVRHSQFVSLQPGFN
FGAWRLRNYSTLNINDGKHQWHSVYSHVSRDIRPLKSRLMIGEGNTDAKVFDSVAYTGVS
LASDNDMLPDSQQGFAPVVRGIARSDAEVTVYQNGNSIYKTSVPPGPFEIDDIYPTGSAG
NLNVTVKESDGSEQNFVVPFASLAVLQREHQLTYSLVAGTTRSDGDAKNALDFIQSDAAW
GRSNALTFYGGLTQAQDIYSSYALGIGANLGNFGALSVDVTQAKAQLADRLTPGNMKSST
GQAWRMRYSKTLQETGTDISVASYRYATRGFYSFQDLINARDTAEEIDNTDHAQHRFDVT
LSQSTKVGSLSLSLMKERYWNQSQMTSMNLGYGNNWGQITYFISYARNMNVTGSDDTKRT
NDSLIALTVNVPFSAFDHKGELTSASMNYAMNSSAHGATMHSLGMSGSALAGNSLNWQVQ
EGYNATNKKTNGNVSLNYQNSWGEMSGGYGYDNFTSRYNYALRGGMVAHADGLTFSRTLN
ESVAIVTAPGAKDIPVNGQNNVHTDAHGNAVVPYVRPYHENAISLDESGLAQESDTDIEN
ITKKVVPTRGAVVKARYQTFAGLKAMLTLTFHGKPVPFGALVTTSDNPDLTAHSDIVGED
GQVYLAGLSPKGQLQVRWGAESAQQCRVDYTLQPASTAGGIIFQQAACE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcccgggcaaatgaatattttaatccgcatttgctggagaccagcgaaacg
tcagcctcagcgcttgatctgaatttattcagcgaggagcaaactccggcgggggattac
aacgtcgatatttatatcaacggtgaattagtcgatgccggtacttttactttccgttat
gtcgacacggcggagaataaacgcctgctgttgccgtgcctcacgctggaacagctacgc
caatggaacatcaaggttgaaaattatccggatctgacaaaacagggtgagacctgcgct
aacctgctggctatccagggcgtgtccgcccggttaatactcaatcagcaacgttttgaa
ctctccattgcgcaactggcgatgacgcatcgcgcgcgcggttatgtgcccgaagaaaaa
tgggatgacggcatcaccgccgggcttttgaattacagtttttccgggcagaccaccacg
tcgcgcgtgagcgatgccgtgcgtcacagccagttcgtcagtctccagccggggtttaac
ttcggggcctggcgactgcgtaactactcaacgcttaacatcaacgatggaaaacatcag
tggcattcggtctacagccacgtctcccgtgatattcgcccgctgaaaagccggctgatg
ataggcgaaggaaatactgacgccaaagtcttcgacagtgtcgcgtacaccggcgtgtcg
ctggcgtccgataatgacatgctgccggacagtcagcagggcttcgcgccagtggtacgc
ggtattgcccgcagcgacgcagaagtgacggtttatcagaacggcaacagtatttacaaa
acctctgtgccgccggggccgtttgaaatcgatgatatctacccgaccggtagcgcgggt
aacctgaacgtgacggtgaaagagtcagacggcagcgagcagaattttgtcgtgcctttt
gcgtcgctggcggtgttacagcgcgagcatcagttaacgtattcgctggttgccggcacg
acccgcagcgatggcgatgcaaaaaacgcgctggattttatccagtctgacgcggcctgg
gggcgatccaacgcgctcacgttctacgggggtctcactcaggcgcaggatatctactcc
agctatgcgctggggattggcgcgaatctcgggaatttcggcgcgctgtcggtagatgtg
acacaggccaaagcgcaactcgccgatcgattaacccccggcaatatgaaaagcagtacc
gggcaggcctggcgtatgcgctatagcaaaacgttgcaggaaaccggcacggatatttcc
gtcgccagttatcgctacgcgacgcgcggcttttactcttttcaggatctgattaacgcc
cgcgacaccgctgaagagatcgataacaccgaccatgcgcagcaccgctttgacgtcacg
ttatcgcaaagtaccaaagtgggctcgctttcgttgtcgctgatgaaagagcgctactgg
aatcagtcgcaaatgacctccatgaacctgggatatggcaataactgggggcagattact
tattttattagctacgcccggaacatgaacgttaccggcagcgatgacactaagcgaacc
aacgatagccttattgcgttgactgtcaatgtgcccttcagtgcgttcgaccataagggg
gaactcacctccgcctcaatgaactacgccatgaacagcagcgcgcacggcgccacaatg
cacagccttggcatgagcggttcggcgcttgccggcaatagcctcaactggcaggtgcag
gaaggctataacgccaccaataagaaaacgaacggcaacgtcagccttaactatcagaat
tcatggggcgaaatgtccggcggctacggttatgacaattttaccagccgctataactat
gcgctgcggggcggaatggtcgcgcacgccgatggcctgacgttttcccgcacgctaaat
gagagtgtcgcgatcgtcacggcaccaggcgcgaaggatattccggtcaatggacagaac
aatgtccacaccgatgctcacggcaacgccgtcgtgccttatgttcgcccgtatcacgag
aatgcgatttcgctcgatgagagcgggcttgcgcaggaaagcgataccgacattgaaaat
atcaccaaaaaagtggtgccgacgcgcggtgccgtggtgaaagcgcgctaccagaccttt
gccgggctgaaagcgatgctgacgctcacctttcatggcaaacccgtgcctttcggtgcg
ctggtcacaacatcggataacccggacctgacagcgcacagcgatatcgtcggcgaggac
gggcaggtttatctggccgggctgagcccgaaagggcagttgcaggtcaggtggggggcg
gagagcgcgcagcagtgtcgggttgactatacgctgcaaccggcttcaaccgctggcggg
attatttttcagcaggcggcgtgtgagtaa
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