Coccomyxa subellipsoidea: COCSUDRAFT_59621
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Entry
COCSUDRAFT_59621 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCSUDRAFT_59621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_59621
03110 Chaperones and folding catalysts [BR:
csl03110
]
COCSUDRAFT_59621
04121 Ubiquitin system [BR:
csl04121
]
COCSUDRAFT_59621
Enzymes [BR:
csl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
COCSUDRAFT_59621
Spliceosome [BR:
csl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
COCSUDRAFT_59621
Complex C
U4/U6.U5 tri-SnRNP related factors
COCSUDRAFT_59621
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
COCSUDRAFT_59621
Chaperones and folding catalysts [BR:
csl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
COCSUDRAFT_59621
Ubiquitin system [BR:
csl04121
]
Ubiquitin ligases (E3)
U-box type E3
COCSUDRAFT_59621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
17037174
NCBI-ProteinID:
XP_005643680
JGI:
59621
UniProt:
I0YL67
LinkDB
All DBs
AA seq
630 aa
AA seq
DB search
MGKKSLKKDRGYITATEWQTEWGGHKDKSRSTFKCLPFNCCAISFTPFEDPACTADGTTY
DITNIVPYVMKFKKHPVTGDPLSLKDVIKLNFHKNSDGEYMCPVLNKVFTEHTHIVAVKP
TGNVYCWEAVEELNIKPKYWKDLLDDTPITRKDIIHLQDPLNLQGKNLENFDHVKKNLSL
QDADELAAQEADPMFSIKAEGLSEDMKRAFEQGGGGKKAQAARLLAEAHSTAKRGGDKAE
AGKQDGAQAGPDPRLQPPKPEDRPAANFKPGTSTWNTDDPSQAPPWVREKMRKEMETGSW
RGQDKDALEAAKAGGQGQKPVPKPYMSAQYREDSMRTTGAASRSFTSTAVNVTTQNARTM
VRVERCPKKKGYMRLHTNLGDLNLELHCDFAPRTCENFFVLAEGGYYSDTIFHRSIRSFM
IQGGDPTGTGTGGESIYGPTFKDELDSRLTHAGRGVLSMANSGPNTNGSQASSLILFYIL
YKSAHHLDFKHTVFGRVVGGFEVLTAMEKVPTDDDDKPRQEIKITGATVFVNPYKEEEEA
ERKAAEEARLKAEKEAGPPTEEERVGAWFSNPVPAAQPSAQGHGTGVGKYLNVHAARKAA
PAASPGAEGEAPGPPAKKAKQASYGNFNAW
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaagcttgaagaaggatcgcggctacatcaccgcgacagagtggcagact
gaatggggcggccacaaggacaagagcagatcaaccttcaagtgtctgcccttcaactgc
tgcgcaatatccttcactccattcgaagacccggcctgcacagcggatgggaccacgtat
gacatcacgaacatcgtgccatacgtgatgaaattcaagaagcacccagtcaccggcgac
ccgctgtccctcaaggacgtcatcaagctgaattttcacaagaacagtgacggggagtac
atgtgccctgtgctcaacaaagtgttcaccgagcacacccacatcgtggcagtcaagccc
actggcaatgtctactgctgggaggctgtagaggagctcaacataaaaccaaagtactgg
aaggaccttctagatgacacgcccatcactcggaaagacatcatccaccttcaggatccc
ctgaatctccaggggaagaacctggagaattttgaccatgtgaagaagaacctcagcctg
caggatgcagatgagctggcggcccaggaggccgaccccatgttcagcatcaaggcagag
ggcctctcagaggacatgaagcgtgcatttgagcagggcggaggtggcaagaaggcgcag
gctgcacggctactggcagaggcgcactcaactgccaagcgagggggtgacaaggcagag
gcgggcaagcaggacggcgctcaggccgggcccgacccaaggctgcagcccccaaagccg
gaggacaggccagcggcaaacttcaagccagggacctccacctggaacacagacgaccct
tcccaggcgcctccctgggtcagagaaaagatgcgcaaggagatggagacgggatcgtgg
cggggtcaggacaaggatgcgctggaggcggccaaggccggcggccaggggcagaagccc
gtgcccaagccttacatgagcgcacagtaccgggaagactccatgcgcaccacaggcgcg
gcttcgcggtctttcacgtcgacggcggtgaacgtgacgacgcagaatgcgcgcacgatg
gtgcgagtggagcgctgccccaagaagaagggctacatgcgcctgcacacgaatctgggc
gacctcaacctggagctgcactgcgatttcgcgccgcgcacatgcgagaatttcttcgtg
ctggcggagggcgggtactactccgacaccatcttccaccgctccatccgtagcttcatg
atccagggtggcgatcctacaggcacaggcacggggggcgagtccatctacgggcccacc
ttcaaggatgagctggactcgcggctcacgcatgcgggccgaggtgtcctctccatggcc
aactcaggccccaacaccaatggctcccaggcaagctccttgatcctgttctatatcctg
tacaagagcgcacaccacctggacttcaagcacactgtgtttggccgcgtcgttggaggc
tttgaggtattgacggcgatggagaaggtgcctacagacgacgatgacaagccgcgccag
gagatcaagatcaccggtgccacggtctttgttaacccctacaaagaagaggaggaagcc
gagcgcaaggctgccgaggaagcccggctcaaggctgagaaggaggcagggccgcctaca
gaggaagagcgagtgggtgcatggttcagcaacccagtgccggcagcacagcccagtgca
cagggccatggcactggagtcggtaagtacctcaatgtgcatgccgccagaaaagcagct
cctgcagcgagcccaggggccgaaggggaagctccggggcctcccgccaagaaggcaaaa
caggcgtcgtatgggaatttcaatgcttggtag
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integrated database retrieval system