Cytobacillus spongiae: LS684_00635
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Entry
LS684_00635 CDS
T09119
Symbol
sigH
Name
(GenBank) RNA polymerase sporulation sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspg03021
]
LS684_00635 (sigH)
Transcription machinery [BR:
cspg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LS684_00635 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_16
HTH_38
HTH_28
HTH_30
HTH_29
UPF0122
COG5_N
HTH_Tnp_Tc3_1
ACDC
HTH_36
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
UII56057
LinkDB
All DBs
Position
123528..124241
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AA seq
237 aa
AA seq
DB search
MTLEKNLLYNISIHACTVGGIIVSADFEVNKNDYLQLEDEEIVELVHKGESEALDYLIHK
YRNFVRAKARSYFLIGADKEDIVQEGMIGLYKAIRDFKEDKLSSFKAFAELCITRQIITA
IKTATRQKHIPLNSYVSLDKPIYDEESDRTLMDVISGVKVTDPEELIINQEEFDHIEVKM
TELLSDLEQKVLALYLDGQSYQEISEELNRHVKSIDNALQRVKRKLERYLEIREFTV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcttgaaaaaaacctactgtataatatttctatccatgcttgtacggtcgggggg
atcattgtgagtgctgactttgaagtaaacaaaaacgactatttacagcttgaagatgaa
gagattgtggaattggttcataaaggagagagtgaggcattagattatttgatacacaag
tatcgaaactttgtccgcgcaaaagcgagatcttattttctaattggtgctgataaagaa
gatattgttcaagaaggcatgattgggttatataaggcaattcgtgattttaaagaggac
aagctctcatcctttaaagcatttgcggagctttgcattactagacaaattattacagct
atcaaaacagcaacaaggcaaaagcatatcccgcttaattcctatgtatctttagacaag
cccatttatgacgaagaatcagatcggacattaatggatgttatttctggtgtaaaggtt
actgatccagaagaactcattattaatcaagaagagtttgatcacattgaagtgaagatg
actgagcttttaagtgatcttgaacaaaaggtgttggccctttatttagatggacaatct
tatcaagagatttctgaggaactaaaccgtcatgtcaaatccattgataatgcattacaa
cgagttaagcggaagcttgaaagatacttagagattcgtgaatttacggtataa
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