Cytobacillus spongiae: LS684_13340
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Entry
LS684_13340 CDS
T09119
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspg03032
]
LS684_13340
03036 Chromosome and associated proteins [BR:
cspg03036
]
LS684_13340
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_13340
DNA replication proteins [BR:
cspg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LS684_13340
Chromosome and associated proteins [BR:
cspg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LS684_13340
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LS684_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
DUF1512
VWA_3
Motif
Other DBs
NCBI-ProteinID:
UII54644
LinkDB
All DBs
Position
complement(2629661..2629933)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELINAVAEASEISKKDATKAVDAVFETILNALKDGDKVQLIGFGNFEVRERAARKG
RNPQTGEEIEISASKVPAFKPGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaactaattaacgctgttgcagaagcaagcgagatttctaaaaaagac
gcaactaaagcagttgatgctgtttttgaaactatcttaaatgctttaaaagacggtgat
aaagtacaattaatcggttttggtaacttcgaggttcgtgagcgtgcggctcgtaaaggt
cgtaatcctcaaactggtgaagagatcgaaatttctgcaagcaaagttcctgcattcaaa
ccaggtaaagcgcttaaagatgcagttaagtaa
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