Capnocytophaga sputigena: CGC55_05230
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Entry
CGC55_05230 CDS
T05393
Name
(GenBank) DNA helicase UvrD
Organism
cspu
Capnocytophaga sputigena
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATA83942
UniProt:
A0A250FFP4
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All DBs
Position
1112566..1115748
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AA seq
1060 aa
AA seq
DB search
MSPSANYTIYNASAGSGKTYSLVKAYLQIILGSKYPDLFRQLLAITFTNKAVFEMKNRII
ELLGVFSEDKMLTNPHPMFSELAKDLKLPDEELRMRSAKTLEHILHNYAAFNISTIDGFN
HQLIRRFSHDLHLNPFFEVQLDSKALLERAVDNLMSKAGNDTELTQLLIDFANEKIDDDK
SWDTTKELLDVAEMLTNENYYEPLQLLKDKEISDFKALKNTLLNQRNNALKTIKTSADDF
MQLMRDHSLDRGAFNRGYLYDFFDKLTVNNPKEPSWGVGWQNNLLQGEPLYANSAAKKYD
TALIDSLQEVVANLFLAIKEAFGTLAFANNALRYVVPLALLNRIQKEIENIKEEENILPI
WEFNGVISSELSNQPVPFIYERIGEKFRHYFIDEFQDTSVLQWQNFIPLILNAVQSEVNK
QRGSVLLVGDAKQSIYRWRGGKAEQFMSLYNNEINPFLIKGEVKDLNKNFRSLEAIIDFN
NLFFNFAADLFQSETYKNLYKNAAQEYPKNKKEQSLPKGYFNLSFITTEEEDMFTEENNN
SNAVILSPRERSYCEAILEKIEHANRAGAADKDITILVRTNREGAAVASFLSEHQRNVIS
PDSLLLKNVASVQFLVTLLRLLYHPESEELKLQLLFDYLRFKSTKDPHLFLSKYVEEPVN
TFLADFQFSIELFNQYSLYEAVALAVNCFDLARPSDAYLTHFMDIVFDFKNARKGGLADF
LEFWDDQQEKLSISSPEGLNAITVMTVHKSKGLSAPVIIYAFADSKLIDTHTEKLWFPVD
HEQFNGFDYLLVNSNKSLVNYDPQAELLMTQLHEQNLLDQLNVLYVAMTRPESFLYVITS
LPKGSAGTYGTLFKEFLEKNEQWNENVVEYTFGNPVFPEKKEKAAAEESPIPFQKGWQQP
NYKIATGASLLWDTHQQEALERGNLIHELFSKITYATDLDTVLNDALQEGTLTAEQYELL
QPQMARLLRDSTLAPFFSEDYEYFMEREFIDANGNYFRPDRLAYNPTTREVYIIDYKTGH
PNDQYRTQLQHYQQNLTAIGWQVKGKYLVYLDLGEVVSEK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatcagcaaattatactatatacaacgcctcggcaggctctggaaaaacctat
agcctcgtaaaggcttacttgcaaattatcctcggcagcaaataccccgatttgtttagg
caattgctcgccattactttcaccaataaggcggtctttgaaatgaagaaccgcattatt
gagcttttaggcgtatttagtgaggacaaaatgctcaccaatcctcaccctatgtttagc
gagttagcaaaggatttgaagctccccgatgaggaactgagaatgcgttcagctaaaact
ttggagcatatactgcacaactacgcagcctttaatatcagcaccattgatggcttcaac
caccaactgatacgccgcttttcacacgatttgcacctcaatcctttctttgaagtgcaa
ttggatagcaaggctttactggagcgtgcggtagataatttgatgagtaaagcagggaat
gatactgaactcacccaactactcatcgattttgccaacgaaaaaatagacgacgacaaa
agttgggacactactaaagaactgcttgacgtagccgaaatgcttactaacgaaaactat
tatgagcctttacaattgctgaaagacaaggaaatatctgattttaaagccctcaaaaac
accctactcaaccagcgcaacaatgccctaaaaacgattaaaacttccgccgatgacttt
atgcaactgatgcgcgaccacagtttagacagaggtgcttttaacagaggttatttatac
gatttcttcgataaactcaccgtcaacaaccctaaggaaccttcgtggggcgttggttgg
caaaacaatctattacaaggcgaaccgctttatgctaattcagcagctaagaagtacgac
actgcccttatcgacagtttgcaagaggtggttgccaacctgtttttggctatcaaagag
gcttttggcacccttgcctttgcaaacaacgcgttgagatatgttgtgcctttggctttg
ctcaaccgcatacaaaaagaaatagaaaacattaaagaagaagaaaacatcttgcctata
tgggagttcaacggagtaatttcttcagagctcagcaaccagcctgtaccttttatctac
gagcgtattggcgagaaattccgtcattatttcatcgatgagtttcaagatacctcagtg
ctgcaatggcagaactttataccacttatcctcaatgcagtacaaagtgaggtaaacaaa
caacgcgggtcggtattgcttgtgggcgatgccaaacaatcgatttaccgttggcgagga
ggcaaggctgaacaatttatgagtctgtataacaatgaaataaaccctttcctcatcaaa
ggagaagtaaaagacctcaacaaaaacttccgaagtttagaagctattatcgatttcaac
aacctttttttcaactttgcagcagacctttttcaaagtgagacttacaaaaacctttat
aaaaacgctgcacaagaatatcccaaaaacaaaaaagaacaatccttacccaaaggctat
ttcaatctctcgtttatcactacagaagaagaggatatgtttacggaagagaataacaac
agcaatgccgttatactttcaccgcgcgaacgcagctattgtgaagccattttagaaaaa
atagaacacgctaaccgtgcaggggctgccgataaggatattactatattggtgcgcact
aaccgcgaaggagctgccgttgcctctttcctctcagaacaccaaagaaatgtgatttct
cccgattcgctattgctgaaaaacgtcgcttcagtacagtttctcgttaccttgttgcgt
ttgctataccaccccgaaagtgaagaactcaaactgcaattactctttgattatctgcgt
tttaaatcgactaaagaccctcacctattcctcagcaaatatgtagaggagcccgtaaat
actttccttgccgattttcagttttctatagagctgttcaaccaatattctctgtatgaa
gcagtcgctttagcggtaaattgctttgatctcgcccgtccttccgatgcttatctcact
cattttatggatattgtattcgatttcaagaatgcacgcaaaggaggtttagccgatttt
ttagagttctgggacgaccagcaagaaaaactcagtatcagttcgcccgaagggttaaac
gctattacggtaatgacagtgcataagagcaaaggtctttctgcccccgtgattatctac
gctttcgccgatagcaaactcatcgacactcacaccgaaaaactttggtttcccgtagac
cacgagcaatttaacggctttgactatctgctggtaaacagcaataaaagtttagtgaac
tacgacccgcaagccgagctactgatgactcaactacacgaacaaaacctcctcgaccag
ctaaatgtgctatatgtagcgatgacgcgccccgaatcgttcctttatgtaatcacctca
ctccccaaaggcagtgctggaacgtatggcacgctctttaaagagtttttagaaaaaaac
gaacagtggaatgagaatgtagtggaatatacctttgggaaccctgtatttcctgagaag
aaagagaaagcagcagctgaagaatcacctattccttttcaaaaaggttggcaacaaccg
aactacaagattgcgacgggagcttccctgctatgggacactcaccaacaagaagccttg
gagcgcggtaacctgattcacgaattattctcaaaaatcacttacgccaccgacctcgac
actgtactcaacgatgcgctacaagagggtacactcactgccgaacaatacgagctattg
caaccccaaatggcgcgattgctcagagacagcactttagcacccttctttagtgaggac
tacgaatactttatggaacgtgagtttatagatgctaatggcaactatttccgtcccgac
cgacttgcctacaaccccaccactcgcgaagtctatatcatagattacaaaaccggacac
cccaacgaccaataccgcacccaactacaacattaccaacaaaacctaacagccatagga
tggcaagtaaaaggaaaatacttagtgtatttggatttaggggaagtggtaagtgaaaaa
taa
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