Acetoanaerobium sticklandii: CLOST_0219
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Entry
CLOST_0219 CDS
T01334
Name
(GenBank) DEAD_2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLOST_0219
09124 Replication and repair
03420 Nucleotide excision repair
CLOST_0219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cst03021
]
CLOST_0219
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_0219
Enzymes [BR:
cst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLOST_0219
Transcription machinery [BR:
cst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLOST_0219
DNA repair and recombination proteins [BR:
cst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLOST_0219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CBH20349
UniProt:
E3PU88
LinkDB
All DBs
Position
258299..260671
Genome browser
AA seq
790 aa
AA seq
DB search
MPSRIEISVRSLVEFVLRSGDLGASSSFSPTRMQEGIRIHQQLQQIKGRYIEKELPLRLD
IKVNDIDFRISGRADGLMLDEGFYIIDEIKSTAKSLSNCEEEEVHLAQAKFYAYIYALDN
KLDNIGANVTYYSLHDEDIKTFEHEYEREELETYVTHILHSYSLFCMLLERLKDERDKSI
LTLEFPFDSYRKGQKKMINDVYRAISQKKRLFVKAPTGIGKTISTIYPALKSLIYEDNEK
IFYLTSKTINREAASDTLMLLKDAGLSVRAIALTAKDKICPYGSCDLNACDYARGHFDRI
NSAIYDILETQDIITRDVILSYSESHKVCPFEFALDISLFCDVIIGDYNYAFDPAVYLKR
FFAEQMGKYIFLMDESHNFIDRARDMFSASIEKTAFLDLRKLIKSAIKDHTMIPKELSDV
LKSIGHINAGFLKLKPEQAKTEFSQKALPENLIKAIRGFIENSDYYFSEYPNANEEAFYQ
DLLSLYFEAHAFIRIAELYDERYTMIGYQYDKNLRIKLFCIDPSALVKDALSRCTSLIAF
SATLIPASYYISMMGGLEDAVYLMLDSPFNPERLKVMIDSSVSTRYSHRQRSIDRVVQRI
HSAVSSKNGNYIAFFPSYEYMNQIYEEFSKAYEEIECIVQERSFTELQREDFLKRFVDQN
THVMVGFAVMGGAFSEGIDLKGDRLSGAIIATVGLPGISYELDLIMEYFNNEGKNGFDYA
YRYQGMNKVMQSAGRVIRTSSDKGFILLLDDRFLEASYQNLMPREWLDFERVSSPLEIKN
SLEQFWQEEK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtagaattgaaatttctgtgcgctctttggtagagtttgtgcttagaagcgga
gatttgggagcgagcagtagcttttcgccaactagaatgcaagaaggcataaggatacat
caacagctccagcagattaaggggagatacattgaaaaagagctacctcttagactggat
atcaaagtaaacgatatagactttcgcatatctgggagagctgatggcttgatgctggat
gagggtttttatatcatagatgaaatcaaaagcacggctaaaagcctgagcaattgtgaa
gaggaagaggttcacttggctcaggctaaattctatgcctatatttatgctctagataac
aagctagataatataggtgcaaatgtaacctattacagcctccatgatgaggatataaaa
acctttgagcatgaatacgaaagagaagagctagaaacctatgtgactcatatcctgcat
agctatagcttgttttgcatgctacttgaaaggctaaaggacgaaagagataaaagcata
cttactttagaatttccttttgattcatatagaaagggtcaaaagaaaatgataaatgac
gtatatagagctatcagtcagaaaaagagactgtttgtaaaagcacctacaggcatagga
aaaacaatatcaaccatttatcctgcacttaaaagcttaatatatgaagacaatgaaaag
atattttatcttacctcaaagaccataaatcgcgaggcggcatcggataccttgatgctc
ttaaaagatgcagggctaagcgtaagagccatagcccttactgcaaaggacaaaatctgt
ccttatggaagctgtgatttaaatgcctgtgattatgcaagagggcattttgacaggata
aattcggctatctatgatattttggaaactcaagatatcataactagggatgtgatactc
agctacagtgagtctcataaggtatgcccctttgaatttgcccttgatatctcgcttttt
tgcgatgtgattataggggattacaattatgcctttgatcctgctgtttacctaaaaaga
ttttttgccgagcaaatgggaaaatatatatttcttatggatgaatctcataatttcata
gatagagctagagatatgttttcagcttctatagaaaaaacagcctttctagaccttaga
aagcttataaaatcagcaattaaagaccatactatgattcctaaggagctttctgatgtt
ttaaaatcaataggacatatcaatgcagggtttttaaagcttaagccagagcaagcgaag
acagagttttctcaaaaagctttgccagagaatttaataaaggcaataaggggctttata
gaaaactcagattattattttagtgagtatccaaatgcaaatgaagaggctttttatcag
gatttactgagtttatattttgaagcccatgcatttataagaattgctgagctttatgat
gaaagatacactatgataggatatcagtatgataaaaatttgagaatcaagttgttttgc
atagatccttcagctcttgtaaaggatgcacttagcagatgcactagccttattgcattt
tctgccactcttattccagcatcttactatataagtatgatgggagggctagaggacgca
gtatatcttatgctagacagtccctttaatcctgagagactaaaggttatgatagattca
agcgtatctactaggtactcccatagacagcgctctattgatagggtagtgcagagaatt
cactcagcagtaagctctaaaaatgggaattacatagctttttttccttcctatgaatac
atgaatcaaatttatgaagagttttcaaaagcctacgaagagattgaatgcatagttcaa
gaaagaagctttactgagcttcaaagagaagactttttaaagcggtttgtagaccagaat
actcacgtgatggtaggctttgcagttatgggaggagctttttctgaaggaatagattta
aaaggagatagactttctggagcaataattgcaactgtaggactaccagggatttcatat
gagctagatttgattatggaatattttaataacgaagggaaaaatggcttcgattatgcc
tatagatatcaaggcatgaacaaagtaatgcaaagcgcaggcagagtcattaggacttca
tcggataaaggctttatacttctgcttgatgatagatttttagaagctagctatcagaat
ctcatgcctagagagtggctggattttgaaagagtaagcagtcctttggaaatcaaaaat
agcttggaacaattttggcaagaagaaaagtag
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integrated database retrieval system
