Cucumis sativus (cucumber): 101208462
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Entry
101208462 CDS
T02486
Name
(RefSeq) DNA repair protein RAD4 isoform X2
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101208462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101208462
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101208462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
101208462
NCBI-ProteinID:
XP_011655233
UniProt:
A0A0A0KQC2
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Position
5:18865543..18881895
Genome browser
AA seq
974 aa
AA seq
DB search
MRGRKQSQRPKKSSGIEDGGEAIPDPGGSCSQTSTDRETLADVSRVAVSKLLSRASGRCL
SGIRKHALRPCDLSKSTIGKDVNLAMDKKVTLETERCNENVIASCSEDVDVPEVNLQNSV
SEVLEDLDDSDWEDGCVRPLDGTESQPLTIEISEIQEIPDSTKRKPIRRASAADKEIAEF
VHKVHLLCLLGRGRLIDRACNDPLIQAALLSLLPAHLLKISPAKQLTATSLKPLVAWLHD
NFHVRNQARSEGSINSALAHALETHEGTSEEIAALTVVLFRALDITARFVSILDVAPIKP
EAERSKCFSQDIGRSSRNIFKNSTLMVDKAEAVDKDSLTSRCLDKKDNPRKRTSGDNRES
NAVNLVGKKTHVLNALSSTGSSSCNSKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSA
TAVETMPSNSSINHLNEPPLNFPPSKKLKRIVNEESASSHGISTAVGSSKEGSPLYWAEV
YCNAENLTGKWVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKW
YKIEAKRVNTLWWDNVLAPLRILEGQAVRGTGHLEKCCIDDLMEQDKLKMSDLSDNLKQK
NLLDDGNQSGKSDHNVSEGLVTDRDFSLGNQVATRDHLEDIELETRALTEPLPTNQQAYK
NHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKHKWLREGLQVRSNELP
VKELKRSIKKIKILESEADDFDQGDSQGTIPLYGKWQLEPLQLPRAVDGIVPKNERGQVD
VWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDV
ILETYNEEAERMEAEERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLSQVTSDIRN
MHDERNADVPSCQEDVEPFKGQPDNLSNTNMDAPSFINQDHKHVFLLEDQIFDEKSLVVT
KRCHCGFSVQVEEL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccgaaaacagtcgcaacgacccaaaaaatcttctggtattgaagatggtggt
gaggccataccagatccaggaggaagctgttcacagaccagtacagacagagaaacttta
gccgatgtttcaagggtggcagtgagcaagcttctaagtcgtgcatctggacgttgcttg
tcaggaataaggaaacatgctctgcgtccatgtgatttgtcaaaatctaccattggaaaa
gatgtaaatcttgctatggacaagaaggtgacattggagactgagaggtgcaatgaaaat
gtaatagcgagctgttctgaggacgttgatgttcctgaagtaaatttacagaattctgta
tcagaagttttagaagatttggatgattccgattgggaagatggttgtgttcgacctttg
gatgggacagagtctcaaccattgactattgaaattagtgagatacaggagatccctgac
tctaccaagaggaaaccgattcgtcgagcttctgctgctgataaggaaattgctgagttt
gtgcataaagttcatttgctttgcttacttggacggggtagattaattgaccgagcttgc
aatgaccctcttattcaggctgctttgctttctcttcttccagcacacttactgaagatc
tcaccggccaagcaactgacagccacctctctgaaacccctggttgcttggttgcatgac
aatttccatgttagaaaccaagcgaggtcggagggttctattaattcagctctagctcat
gctcttgaaacgcatgaagggacttcagaggagattgctgcattgaccgtagtgcttttt
agagctttggatataacagctcggtttgtatctattttggacgttgctcctataaaacca
gaggccgaaagatctaaatgttttagccaagacataggcagatcaagtagaaacattttc
aagaactcaactttgatggtagataaagcagaagcagttgataaagattctcttacatca
cgttgtcttgacaagaaggataatccccggaaaagaacttctggtgataatcgtgaaagc
aatgcagtcaatttagtaggcaagaaaactcacgtccttaatgctttgtctagcaccgga
agttctagttgtaactcaaaacctgatatctctgaaaccttcccccccaagaactctcag
gtacagaagaggaagggggatattgagtttgaaatgcagttacaaatggctctctccgct
acagcagttgagactatgcccagtaattctagcataaatcacttaaacgagcctcctttg
aactttcctccgtctaaaaaactgaaaagaattgttaatgaagaatctgcctcttctcat
ggaatctccactgctgttggttcaagcaaggagggatctcccttgtattgggcagaagta
tactgcaatgcagagaacttgacaggtaagtgggtacacattgatgctgtaaatatggtt
gttgatggagagcacaaagtggaggacttagctgctgcatgcaaaacatctttgagatat
gtggttgctttttctgggcttggtgcgaaagatgtgactcgcagatattgtatgaagtgg
tacaagattgaagcaaaacgagttaatactctttggtgggataatgtattggccccatta
aggatacttgaaggacaggcagtgaggggcactggtcacttggaaaagtgctgcattgat
gacttgatggaacaagataaattgaaaatgtcagacttgtcagataacttgaagcagaaa
aatcttctagatgatggtaaccagtcagggaagtctgatcacaatgtgtcagaagggctt
gtcactgaccgagacttttctttgggtaatcaagttgctaccagagaccatctcgaggat
atagaattagaaactcgggcactcactgaacctcttccaactaatcagcaggcttacaaa
aaccatcgtttatatgcccttgaaaaatggctaaccaagtatcagatacttcatccaaag
ggtcctgttctgggtttttgttctggatatccagtttaccctagaacctgtgtccaagtg
cttaagacaaagcacaagtggttgcgtgagggactgcaagtcagatctaatgaactacct
gttaaggagttgaaacgttccataaagaaaatcaaaatactagaatctgaagctgatgac
tttgatcagggtgattcccaaggaaccattccactctatgggaagtggcagttagaacca
ttgcaactgcctcgtgcagttgatgggattgtaccaaaaaatgaacgtggtcaagtggat
gtgtggtctgaaaagtgccttcccccaggaactgtgcacatcaggttgcccagggtgttc
agtgttgccaagaagctggaaattgattatgcacctgccatggttggctttgaatttcga
aatggccgatcatatcctatttatgatgggattgttgtttgttccgagtttaaagatgta
atattagagacatacaatgaggaagcagagagaatggaggctgaagagagaagactgaga
gaaaaacaagctatttcaagatggtatcagcttctttcttcgatcataactcggcaaagg
ttgaacagccgttatggggatagtgagaatctatcgcaagtgacgagtgacatccggaac
atgcatgatgagcgtaatgcagatgttccttcttgtcaagaggatgtagaacctttcaag
ggccagccggataacttaagtaatactaatatggatgctccatcttttatcaatcaggat
cacaagcatgtattcctgttagaggatcaaatttttgacgagaaaagtttggttgtgaca
aaacgctgtcattgtggtttttctgttcaagtcgaagaattgtag
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