Cucumis sativus (cucumber): 101215606
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Entry
101215606 CDS
T02486
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101215606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101215606
03029 Mitochondrial biogenesis [BR:
csv03029
]
101215606
Membrane trafficking [BR:
csv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101215606
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101215606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
101215606
NCBI-ProteinID:
XP_011648905
LinkDB
All DBs
Position
2:4039865..4047931
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AA seq
370 aa
AA seq
DB search
MANQPSSYPVLCASFNQDASLFAIGTRDGFRILDSNNGRLCYERALGAFNIVEMLFSSNL
VAIVGAGEQPSLSPRRLCLFNTMSGNALRELNFLTSILAVRMNRKRLVVLLQDKTYIYDI
NSLTILDTIDTVPNSKGTCAFSPSLDGCFLAIPASITKGSLLLYNVMELQLHCEIEAHRA
PLATMVLSSNGMYIATASEQGTMIRVHLVSEATKSYSFRRGSYPSTIFSLSFGPCSQVPE
ILVATSSSGSVHVFPLGFAINQRSSRRSGGFLGSIMPDSISDALDPAHHHIVHNAAPAGI
KSYAVIRKVDRVSDPSTSEIVACRATLAIITYNGYFQEYTLSLNNHNEFSRSLDREFNLM
TVITDNDVRL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaccatcttcgtatccagtcctatgtgcttccttcaatcaggacgctagt
ttatttgcaataggcacaagagatggtttccgaatacttgattccaataatggaaggcta
tgctatgaacgagctcttggtgcattcaatattgttgagatgctgtttagctctaatctt
gttgccattgttggagctggtgaacagccatctttatccccacgtcgtctttgcttgttt
aatacaatgagtggaaatgctcttagagaactgaattttttaacttcaatactagctgtt
cgcatgaataggaaaagacttgttgtactacttcaagataagacatacatatacgacata
aatagtctcacaatcttggacacgattgatacggtaccaaattcaaaaggaacctgtgca
ttctcccccagtttggatggttgcttcttagctattccagccagcatcaccaagggatct
ctgttgctgtacaatgtcatggagcttcagctgcactgcgagatagaggctcatcgtgca
ccactagccacaatggttctttcttcaaatgggatgtacatagcaacagcatcagaacaa
ggaactatgataagagtgcatctggtatccgaagcaactaagtcatatagttttcgcaga
ggatcatatccatcaactatattttccttgtcctttgggccatgttctcaagttccagaa
attttggtggcaactagttcttctggttctgttcatgtttttcctcttggatttgctata
aaccaaagaagcagcagaaggtcaggtggctttcttggatcgataatgcctgattcaata
agtgatgcactagatccagctcatcatcacatagttcataatgctgcaccagcaggaatc
aaaagctatgcagtgatacgcaaggtcgacagggtttctgacccttcaacttctgaaatt
gtagcttgcagggccacattagcaatcataacctacaatggttacttccaggagtacacc
ctaagtctcaacaaccataatgagttctcaagaagtctggaccgtgaattcaatcttatg
actgtgataactgataacgacgttaggttatga
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integrated database retrieval system
