Cronobacter sakazakii Sp291: CSSP291_19035
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Entry
CSSP291_19035 CDS
T02461
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz00540
Lipopolysaccharide biosynthesis
csz01100
Metabolic pathways
csz01250
Biosynthesis of nucleotide sugars
Module
csz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CSSP291_19035 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
csz01005
]
CSSP291_19035 (rfaD)
Enzymes [BR:
csz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CSSP291_19035 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
csz01005
]
Core region
CSSP291_19035 (rfaD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AGE88370
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Position
complement(4071923..4072855)
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDIGYTDILVVDNLKDGTKFVNLVDLNIADYMDKEDFQVQI
MSGEEFGEVEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQITGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAALAFHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgcgggttttatcggcagcaacattgttaaggctctgaac
gacatcggctataccgacattctggtggtggacaacctgaaagacggcaccaagttcgtc
aacctggtggatctgaatatcgccgattacatggataaagaagatttccaggtgcagatc
atgtctggcgaggagttcggcgaggttgaagccgtgttccacgaaggcgcctgctcatcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactccaaagagcta
ctgcactactgcctggagcgcgaaattccgttcctttatgcctcttccgccgccacctac
ggcgggcgcacctctgactttatcgaatcacgcgaatatgagaagccgctgaacgtatac
ggctactcgaaattcctgttcgatgaatatgttcgccagatcctgccggaagcgaactcg
cagatcaccggcttccgttactttaacgtctacggaccgcgcgaaggccacaaaggcagc
atggcgagcgtggcgttccacctcaatacgcaactgaacaacggcgaaagcccgaaactg
tttgaaggcagcgaaaacttcaagcgcgacttcatctacgtgggcgatgtggccgcggtg
aacctgtggttctggcagaacggcgtatccggcattttcaactgcggcaccggccgtgcg
gagtcgttccaggccgtggcggatgccgcgctggccttccataagaaaggcagcatcgaa
tacatcccgttcccggaaaaactcaaaggccgctatcaggcgtttactcaggccgatctc
actaacctgcgcgctgcgggctacgacaagccgtttaaaaccgttgccgaaggggtcgcg
gaatatatggcctggctgaatcgcgacgcataa
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