KEGG   Chryseobacterium taihuense: NCTC12078_00282
Entry
NCTC12078_00282   CDS       T07055                                 
Symbol
ssb_1
Name
(GenBank) Helix-destabilizing protein
  KO
K03111  single-strand DNA-binding protein
Organism
ctai  Chryseobacterium taihuense
Pathway
ctai03030  DNA replication
ctai03430  Mismatch repair
ctai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC12078_00282 (ssb_1)
   03430 Mismatch repair
    NCTC12078_00282 (ssb_1)
   03440 Homologous recombination
    NCTC12078_00282 (ssb_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctai03032]
    NCTC12078_00282 (ssb_1)
   03400 DNA repair and recombination proteins [BR:ctai03400]
    NCTC12078_00282 (ssb_1)
   03029 Mitochondrial biogenesis [BR:ctai03029]
    NCTC12078_00282 (ssb_1)
DNA replication proteins [BR:ctai03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NCTC12078_00282 (ssb_1)
DNA repair and recombination proteins [BR:ctai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     NCTC12078_00282 (ssb_1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    NCTC12078_00282 (ssb_1)
Mitochondrial biogenesis [BR:ctai03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    NCTC12078_00282 (ssb_1)
SSDB
Motif
Pfam: SSB AgI_II_C2 DUF3217 tRNA_anti-codon
Other DBs
NCBI-ProteinID: VFB02307
UniProt: A0A4U8W7U5
LinkDB
Position
1:288187..288519
AA seq 110 aa
MSLRNKVTLIGFTGKEVEKVNFENGGMKISVSLATNDHYTNAKGEKVEETQWHNLVAFGK
TAEIFQKYVTKGKEIAIEGKLTYRSYEDKDGVKRFITEIRVDELLLLGSK
NT seq 333 nt   +upstreamnt  +downstreamnt
atgtcactaagaaacaaagtaaccttaatcgggttcacaggaaaagaagttgaaaaggta
aacttcgaaaacgggggaatgaaaatttcagtttctctcgctacaaacgatcattacacc
aacgctaaaggtgaaaaagtagaagaaacgcaatggcataatctggtggctttcggaaaa
actgcggagatttttcagaaatatgtcaccaaaggaaaagaaatcgctattgaaggaaaa
ttaacgtacagatcatacgaagataaagatggtgtgaaaagatttatcactgagataaga
gtggatgaacttctgcttttaggcagtaaataa

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