Chryseobacterium taklimakanense: 4412677_02549
Help
Entry
4412677_02549 CDS
T05512
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4412677_02549 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctak03019
]
4412677_02549 (rhlE_2)
Enzymes [BR:
ctak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4412677_02549 (rhlE_2)
Messenger RNA biogenesis [BR:
ctak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
4412677_02549 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
P-loop_SecA
UTP25
Flavi_DEAD
HEM4
SUa-2TM
Phage_integrase
UvrD-helicase
AAA_22
SMC_N
ATG11
Zap1_zf1
Motif
Other DBs
NCBI-ProteinID:
SNV50955
UniProt:
A0A239XVX6
LinkDB
All DBs
Position
1:complement(2610842..2612092)
Genome browser
AA seq
416 aa
AA seq
DB search
MLFTELKLIKPILDALQKEGYERPTPIQEQSVPSILEGKDLLGTAQTGTGKTAAFAIPIL
QNLHQKNIRNNQIKALILTPTRELAIQIEESFKAYGANLPLRTLAIFGGVKQGAQENALK
RGVDILVATPGRLLDFISQGIISLKNLEIFVLDEADRMLDMGFVHDVKRVVKLLPQKRQT
LFFSATFPKEIQELANSMLTNPVKVSVTPVSSTADTIQQSVYFVEKENKLDLLTHILKNH
IDESVLVFARTKHGADKIARKLQKEKISAEAIHGNKSQNQRQNALTNFKSGKTRILVATD
IAARGIDIDELKHVINFELSDVSETYVHRIGRTGRAGNEGSSISFVDGLDLINLKNTEKL
IGKKIPVVKDHPFHTDDLVVQKRDSNNKPFTPKPKPQTKETISFKKPKNKGFFRKK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgttatttaccgaattaaaacttattaagcccatcctcgatgcgcttcaaaaggaaggt
tacgaaagacctacacccattcaggaacagtctgtcccgtcaattttagaaggaaaagat
ttattgggaaccgcacaaaccggaaccggcaaaaccgccgctttcgccatccccatcctg
caaaatcttcatcagaaaaacatcaggaacaaccagataaaagccttaatcctaacgcca
acccgagaactggcaattcagattgaagaaagcttcaaagcgtacggcgccaatcttccg
ctgcgaactttggcgatcttcggcggcgtgaaacagggcgcccaggaaaatgcactgaag
aggggcgtcgatatcttggtggcgacgccgggaaggctgctggattttatttcacaaggc
atcatttcactaaaaaatcttgaaatttttgtactcgatgaagccgaccggatgctcgac
atgggttttgtgcacgatgtgaaacgagtggtgaaacttttgccgcaaaaaagacagact
ttatttttctccgccacatttccaaaagaaattcaggaacttgccaattcgatgctcacg
aacccggtgaaagtttcggtgacgccggtttcctctactgcggacaccatccagcagtcc
gtttatttcgttgaaaaagaaaataaactggatttgctcacgcatattttgaaaaaccac
atcgatgaatctgtgctggtttttgcgagaaccaaacacggtgcagacaaaattgcgcgc
aaactgcagaaagaaaagatttccgccgaggccatccatggaaataaatcccaaaaccaa
aggcagaacgctttaaccaattttaaatccggcaaaacgagaattttggtcgcgacggat
attgcagcacgcggcatcgacatagacgagttgaaacacgtgattaattttgaactttcc
gacgtttcagaaacctacgttcaccgcatcggaagaaccggcagagccggtaatgagggc
agttccatctcttttgtggacggcctggatttaatcaatttaaaaaataccgaaaaactg
attggtaaaaaaatcccggtggtaaaggaccatccatttcataccgacgatttggtggtg
cagaaaagagacagcaacaataagcctttcacgccgaaaccgaaaccgcaaaccaaagaa
accatcagtttcaaaaagccgaaaaataaaggatttttcaggaagaaataa
DBGET
integrated database retrieval system
