Comamonas testosteroni TK102: O987_01340
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Entry
O987_01340 CDS
T03218
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O987_01340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_01340
Enzymes [BR:
ctes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
O987_01340
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
O987_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AIJ44465
UniProt:
A0A076PLD7
LinkDB
All DBs
Position
complement(304597..305400)
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AA seq
267 aa
AA seq
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MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF
AEKKGYSGVGVYTRHEPSDVVVGFDIDEFDAEGRYVETRFDTPTRKLSVISAYFPSGSSG
ELRQEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQQADLKNWRGNQKNSGFLPEERD
WMTKLLHKTEISGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAVAA
LARTESIYKGEKFSDHAPITIGYDLTL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagcctcaacctcaacggtatccgctctgccacgaccaaaggcgcc
gaagcctggatcgaagccactgcgccggattgtatttgtgtccaggaaatcaaggcccag
gcttcggatatggccgggcgcttcgaagtgttggccggcatgaagggctacttccacttt
gccgagaagaagggctactcgggcgtgggcgtctatacccgccacgagcccagcgatgtg
gtcgtgggcttcgacatcgacgagttcgacgccgaaggccgctatgtcgaaacccgcttc
gacacccccacgcgcaagctctccgtcatcagcgcctactttcccagcggcagctcgggc
gagctgcgccaggaagccaagttccgctttctggccaagatgcacagtcacttgatgcac
ctcaaggccgagcgtgacttcgtgctctgtggcgacatcaacatcgcccaccagcaggcc
gacctgaagaactggcgcggcaaccagaagaacagcggcttcctgcccgaagagcgcgac
tggatgacgaagctgttgcacaagaccgagatcagcggcggtctggtggacgtctaccgc
ctgctccagcccgacaccacggatgcctgctacacatggtggagcaaccggggccaggcc
tatgccaacaacgtgggatggcgactggactaccacctggccacgccggcggtcgcggcc
ctggcacgcaccgagtccatctacaagggcgagaagttctcggaccacgcgcccatcacc
attggctatgacctgacgctctga
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