KEGG   Comamonas testosteroni TK102: O987_16210
Entry
O987_16210        CDS       T03218                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ctes  Comamonas testosteroni TK102
Pathway
ctes03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ctes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    O987_16210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctes03400]
    O987_16210
DNA repair and recombination proteins [BR:ctes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O987_16210
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      O987_16210
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 AAA_22 Kinesin AAA_25 UB2H DUF87
Other DBs
NCBI-ProteinID: AIJ47357
UniProt: A0A076PVJ9
LinkDB
Position
complement(3460662..3462749)
AA seq 695 aa
MRHGHEIMQEQNMTAEPQGRFVQYPDSPFELFQPYPPAGDQPTAIEKLVEGVNDGESFQT
LLGVTGSGKTFTMANVIARLGKPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYY
QPEAYVPQRDLFIEKDSAINEHIEQMRLSCTKSIMERRDVVIVATVSAIYGIGEPESYHR
MIMTLRAGDTLNQRDAIAQLIRMQYQRNDQDFSRGTFRVRGDTIDVFPAEHSELAVRIEL
FDDEVESLQLFDPLTGRVRQSIPRFTIYPSSHYVTPRDKVLAAVETIKEELAERLKQLVG
MGKLVEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSASRPGDPPSTLTDYLPRDSIMF
LDESHQMIGQLNAMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVVFVSATP
AEYEKTHAGQVVEQVVRPTGLVDPEIEVRPAIHQVDDVLQEIRQRVELEERVLITTLTKR
MAEQLTEYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSL
VAILDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRITESMKKAIGETERRREKQMA
FNEANGIVPKQIVKRVKDLIDGVYSEKSGKEAERLQEQALQQARVEDMTEKDIAREIKRL
EKQMLEHARNLEFEQAARVRDQLSLLKQQLFGAAP
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgcgtcatggacatgagatcatgcaagaacaaaatatgactgccgagccgcaaggccgt
ttcgtgcaatatccggactcgccgttcgagctgttccagccctatccgcccgctggagat
cagcctacggccatcgaaaaactggtcgaaggcgtcaatgacggcgagtccttccagacg
ctgctgggcgtgacgggctcgggcaagaccttcaccatggccaatgtgatcgcgcgtctg
ggcaagccggccatcgtttttgcgcccaacaagacgctggcggcacagctgtactcggag
ttcagggagtttttcccgaaaaatgcggtcgagtacttcgtcagctactacgactactac
cagcccgaagcctatgtgccccagcgcgacctgttcatcgaaaaggacagcgccatcaac
gagcacatcgagcagatgcgcctgtcctgtaccaagagcatcatggagcggcgcgacgtg
gtgatcgtggccactgtctcggccatctacggcatcggcgagcccgagagctaccaccgc
atgatcatgacgctgcgcgcgggcgacacgctcaaccagcgcgacgcgatcgcgcagttg
atccgcatgcagtaccagcgcaacgaccaggatttctcgcgcggcaccttccgcgtgcgc
ggcgacaccatcgacgtgtttccggccgagcattcggagctggccgtgcgcatcgagctg
ttcgacgacgaggtcgaaagcctgcagctgttcgatccgctcacgggccgggtgcgccag
agcattccgcgcttcaccatctatcccagtagccactatgtgacgccgcgcgacaaggtg
ctggcggccgtggagaccatcaaggaagagctggccgagcgcctcaagcagctcgtgggc
atgggcaagctggtggaggcgcagcgcctggagcagcgcacgcgcttcgatctggaaatg
ctcagcgaagtgggacactgcaaggggatcgagaactacacgcgccatctctcggcctcc
cggcccggcgatccgcccagcacgctgaccgactatctgccgcgcgactccatcatgttc
ctcgatgagagccatcagatgatcggccagctcaacgccatgtacaacggcgaccgggcg
cgcaagaccacgctggtggaatatggctttcgcctgccgtcggcgctggacaatcgcccg
ctcaagttcgaggagttcgagcagcgcatgcgccaggtggttttcgtctcggccacgccc
gccgaatacgaaaagacccatgccgggcaggtggtggagcaggtggtgcgtcccacgggc
ctggtcgatcccgagatcgaagtgcggccggccatccaccaggtcgatgacgtgttgcag
gagatccgccagcgcgtggagctggaggagcgcgtgctcatcaccacgctgaccaagcgc
atggccgagcaactgaccgaatacctgaccgacaacggcgtgaaggtgcgctatctgcac
tccgatgtggacacggtggagcgcgtggaaatcatccgcgacctgcgcctgggggccttt
gatgtgctggtcggcatcaacctgctgcgcgaaggcctggatattcccgaggtctcgctg
gtggcgatcctggatgccgacaaggaaggttttctgcgtgccgagcgcagcctgatccag
accatcggtcgcgcggcgcgcaacgtcaacggcaaggcgattctctatgcggaccgcatc
accgagtccatgaagaaagccatcggcgaaaccgaaagacgccgcgaaaaacagatggct
ttcaatgaagccaacgggatcgtgcccaagcagattgtcaagagggtgaaagacctgatt
gatggtgtctacagcgaaaagagcggcaaagaggctgaacgcctgcaggagcaggcccta
cagcaggcacgtgtcgaggacatgacagagaaagacatcgccagggagatcaagcgtctg
gagaagcaaatgctcgagcacgccaggaacctggaattcgagcaggcagcgcgtgtgcga
gaccagctctcgcttctcaagcagcaattgttcggcgcggcgccgtag

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