Comamonas testosteroni TK102: O987_16210
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Entry
O987_16210 CDS
T03218
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ctes
Comamonas testosteroni TK102
Pathway
ctes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O987_16210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctes03400
]
O987_16210
DNA repair and recombination proteins [BR:
ctes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O987_16210
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O987_16210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
AAA_25
UB2H
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIJ47357
UniProt:
A0A076PVJ9
LinkDB
All DBs
Position
complement(3460662..3462749)
Genome browser
AA seq
695 aa
AA seq
DB search
MRHGHEIMQEQNMTAEPQGRFVQYPDSPFELFQPYPPAGDQPTAIEKLVEGVNDGESFQT
LLGVTGSGKTFTMANVIARLGKPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYY
QPEAYVPQRDLFIEKDSAINEHIEQMRLSCTKSIMERRDVVIVATVSAIYGIGEPESYHR
MIMTLRAGDTLNQRDAIAQLIRMQYQRNDQDFSRGTFRVRGDTIDVFPAEHSELAVRIEL
FDDEVESLQLFDPLTGRVRQSIPRFTIYPSSHYVTPRDKVLAAVETIKEELAERLKQLVG
MGKLVEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSASRPGDPPSTLTDYLPRDSIMF
LDESHQMIGQLNAMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVVFVSATP
AEYEKTHAGQVVEQVVRPTGLVDPEIEVRPAIHQVDDVLQEIRQRVELEERVLITTLTKR
MAEQLTEYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSL
VAILDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRITESMKKAIGETERRREKQMA
FNEANGIVPKQIVKRVKDLIDGVYSEKSGKEAERLQEQALQQARVEDMTEKDIAREIKRL
EKQMLEHARNLEFEQAARVRDQLSLLKQQLFGAAP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatggacatgagatcatgcaagaacaaaatatgactgccgagccgcaaggccgt
ttcgtgcaatatccggactcgccgttcgagctgttccagccctatccgcccgctggagat
cagcctacggccatcgaaaaactggtcgaaggcgtcaatgacggcgagtccttccagacg
ctgctgggcgtgacgggctcgggcaagaccttcaccatggccaatgtgatcgcgcgtctg
ggcaagccggccatcgtttttgcgcccaacaagacgctggcggcacagctgtactcggag
ttcagggagtttttcccgaaaaatgcggtcgagtacttcgtcagctactacgactactac
cagcccgaagcctatgtgccccagcgcgacctgttcatcgaaaaggacagcgccatcaac
gagcacatcgagcagatgcgcctgtcctgtaccaagagcatcatggagcggcgcgacgtg
gtgatcgtggccactgtctcggccatctacggcatcggcgagcccgagagctaccaccgc
atgatcatgacgctgcgcgcgggcgacacgctcaaccagcgcgacgcgatcgcgcagttg
atccgcatgcagtaccagcgcaacgaccaggatttctcgcgcggcaccttccgcgtgcgc
ggcgacaccatcgacgtgtttccggccgagcattcggagctggccgtgcgcatcgagctg
ttcgacgacgaggtcgaaagcctgcagctgttcgatccgctcacgggccgggtgcgccag
agcattccgcgcttcaccatctatcccagtagccactatgtgacgccgcgcgacaaggtg
ctggcggccgtggagaccatcaaggaagagctggccgagcgcctcaagcagctcgtgggc
atgggcaagctggtggaggcgcagcgcctggagcagcgcacgcgcttcgatctggaaatg
ctcagcgaagtgggacactgcaaggggatcgagaactacacgcgccatctctcggcctcc
cggcccggcgatccgcccagcacgctgaccgactatctgccgcgcgactccatcatgttc
ctcgatgagagccatcagatgatcggccagctcaacgccatgtacaacggcgaccgggcg
cgcaagaccacgctggtggaatatggctttcgcctgccgtcggcgctggacaatcgcccg
ctcaagttcgaggagttcgagcagcgcatgcgccaggtggttttcgtctcggccacgccc
gccgaatacgaaaagacccatgccgggcaggtggtggagcaggtggtgcgtcccacgggc
ctggtcgatcccgagatcgaagtgcggccggccatccaccaggtcgatgacgtgttgcag
gagatccgccagcgcgtggagctggaggagcgcgtgctcatcaccacgctgaccaagcgc
atggccgagcaactgaccgaatacctgaccgacaacggcgtgaaggtgcgctatctgcac
tccgatgtggacacggtggagcgcgtggaaatcatccgcgacctgcgcctgggggccttt
gatgtgctggtcggcatcaacctgctgcgcgaaggcctggatattcccgaggtctcgctg
gtggcgatcctggatgccgacaaggaaggttttctgcgtgccgagcgcagcctgatccag
accatcggtcgcgcggcgcgcaacgtcaacggcaaggcgattctctatgcggaccgcatc
accgagtccatgaagaaagccatcggcgaaaccgaaagacgccgcgaaaaacagatggct
ttcaatgaagccaacgggatcgtgcccaagcagattgtcaagagggtgaaagacctgatt
gatggtgtctacagcgaaaagagcggcaaagaggctgaacgcctgcaggagcaggcccta
cagcaggcacgtgtcgaggacatgacagagaaagacatcgccagggagatcaagcgtctg
gagaagcaaatgctcgagcacgccaggaacctggaattcgagcaggcagcgcgtgtgcga
gaccagctctcgcttctcaagcagcaattgttcggcgcggcgccgtag
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