Clostridium tyrobutyricum: CTK_C01630
Help
Entry
CTK_C01630 CDS
T04331
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTK_C01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C01630
Enzymes [BR:
ctyk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CTK_C01630
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTK_C01630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
AAA_11
Helicase_RecD
Viral_helicase1
PIF1
AAA_22
DEAD
PhoH
SRP54
HHH_2
SLFN-g3_helicase
DNA_pol_lambd_f
nSTAND3
T2SSE
AAA_12
AAA_28
HerA_C
AAA
AAA_29
UvrD_C
AAA_16
ABC_ATPase
ABC_tran
NTPase_1
UvrD-helicase
Thymidylate_kin
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AND83433
LinkDB
All DBs
Position
179888..182182
Genome browser
AA seq
764 aa
AA seq
DB search
MQELQGIVDEIVYQNEKNGYTVARIKGKDGITVIVGSIPFIMEGQNLKLTGDWSVHPKFG
RQLKIKYSEEILPTSSTGIERYLSSGAISGIGPVTAKKIVERFGEDTLDVLDNHIERLRE
IEGIGQKKIDLICKSYSKQVEVRNIMIFLQTYGVTPNQCVKIHKKFGAASIKTVKENPYV
LTEEISGIGFKIADRIARSLGIEGNSPFRIQSGIKYIVSKFCNFGNTYMPLKKLEEEALD
VLEVTKDEIEENIYDSSLKGTIKLEKFEDNICVFLPIYYYCELSVTKKILYLSFSEYDEI
ELDIDKEISEFESQNNIQFAESQKKAIIGAVENGVEIITGGPGTGKTTIINCITKIFEKA
KLRVFMAAPTGRAAKRMSESANREAKTIHRLLEMNASSDEDEIMFSRSEDITLECDVVIV
DEASMIDIILMNNLLKAISIGTRVIIVGDVDQLPSVGPGNVLKDFIESKCIKVVRLKEIF
RQSKESMIIVNAHRINSGMMPFLNKKDKDFYFIKCDDQNKILDTLIQLVDKRLPGFNKSW
NKLSDIQVVSPMRKGILGVLNLNNRLQNVLNCKSKDKNEKEFRNVLFRVGDKVMQTKNNY
SLKWESILNSGEESGLGIFNGDVGYVESINNENNTLSVIFDDEKRVMYDNIYLDELTLAY
AVTIHKSQGSEFPVIVMPVFMGSSFLMNRNLLYTAVTRAKQMVVLVGELKALKFMIDNNK
SFDRYSLLKNRIMDIMESEDNVALEKDAPWRGEDKSRTGYNKMD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttacaaggtattgtagatgaaatagtatatcaaaatgagaaaaatggatat
acagttgccagaataaagggaaaagatggaattacagttatagtaggcagtataccattt
attatggaaggacaaaatttaaagttaacgggagactggtcagtccatcccaagtttggc
aggcagcttaaaattaaatattctgaggagatattgccaactagttccactggaatagaa
agatacttatcatctggggcaatatcgggcataggacctgtaactgcaaagaaaatagta
gagagatttggtgaagatacattagatgtattggataatcatatagaaagacttagagag
atagaaggtattggacaaaaaaagatagatttaatttgtaaatcctattcaaaacaagta
gaagtaagaaatataatgatatttttacaaacttatggggttactccaaatcaatgtgta
aagatacataagaagtttggagcagcatctataaaaacagttaaggaaaatccatatgta
cttacggaagaaatatcaggcataggctttaaaattgctgatagaatagctagaagtttg
ggaatagaaggcaattcaccatttagaattcagagtggtattaaatatatagtaagtaag
ttttgtaattttggcaacacatatatgccgttaaaaaaattagaggaagaagcgctggat
gtacttgaggtgacaaaagatgagatagaagaaaatatatatgacagctcacttaaagga
actataaaattggagaaatttgaagataatatctgtgtattcttacctatttattattat
tgcgagcttagtgtgacaaaaaaaatattatatttgtcatttagtgagtatgatgaaatt
gaattagatatagataaagaaatttcagaatttgaatcacaaaataatatacaatttgca
gaatcacaaaaaaaagctataataggtgcagtggaaaatggagtggaaataataacagga
ggacctggtacgggaaagactactataataaattgtattaccaaaatatttgaaaaggca
aagctaagggtatttatggcagcacctacaggaagggctgcaaagagaatgtcagaatct
gcaaatagagaggcaaaaactatacaccggcttttagaaatgaatgcatctagtgatgaa
gatgaaattatgttttctagaagtgaagatattacactggaatgtgatgtagtgattgta
gatgaagcatccatgatagatataattcttatgaataatttacttaaggcaatttctatt
ggcactagagttataatagtaggagatgtagatcaacttccttcagttggaccaggaaat
gtacttaaggattttatagaaagcaagtgcattaaagtagttaggttaaaagagatattc
agacaatccaaagaaagtatgataatagtaaatgcacatagaataaattctggtatgatg
ccgtttttaaataaaaaggataaggacttttacttcataaaatgtgatgaccagaataaa
atactggatacattgattcaattggttgacaaaagactgcctggctttaataaatcatgg
aataaattaagtgatattcaagtagtttcacctatgagaaaaggtattcttggagttctt
aatttaaataacagacttcaaaatgttttgaattgtaaaagtaaagataaaaatgaaaag
gaatttagaaatgtactatttagagttggggataaggtgatgcagacaaagaacaattat
tcgttaaaatgggaatcaattctaaacagtggagaagaaagcggattgggaatatttaat
ggggatgtaggttacgtagagagtataaataatgaaaataatactttatcagtaattttt
gatgatgaaaaaagagttatgtatgataatatatacttagatgagttaactttggcttat
gcagtaaccatacacaaaagtcaaggaagcgaattcccggtaatagtcatgcctgtattt
atgggatcaagttttttgatgaataggaatcttctatatacagctgtaaccagggcaaaa
caaatggttgtactggttggtgagttaaaggcgctaaaatttatgatagacaacaacaag
agtttcgacagatattctttattaaaaaatagaataatggatataatggagagtgaagat
aatgttgctttggaaaaagatgcaccttggagaggagaagacaagagtagaacaggatat
aataaaatggattaa
DBGET
integrated database retrieval system
