Cheilinus undulatus (humphead wrasse): 121522380
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Entry
121522380 CDS
T07473
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121522380 (ddx18)
03009 Ribosome biogenesis [BR:
cud03009
]
121522380 (ddx18)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121522380 (ddx18)
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121522380 (ddx18)
Ribosome biogenesis [BR:
cud03009
]
Eukaryotic type
90S particles
Helicases
121522380 (ddx18)
Pre-60S particles
121522380 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
121522380
NCBI-ProteinID:
XP_041662595
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All DBs
Position
15:14928849..14939319
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AA seq
663 aa
AA seq
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MADLQMKLLRKKIQKRSEKNKQRKLLKSQTEEEETVNANGLKESCENPETENKPEEKKTE
KPTEGTTTEETSLKKKKKKKKRKAVDTAESPAEKKTKTVKDEEEDEVEDEGTTADEDGEK
STEMPEEAADEKEGDDNDDEEEDDKDKDEDDEEEDMPELPSGLTGAFEDTSFASLAELVS
ENTLKAVKDMGFTHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFM
PRNGTGVVILSPTRELAMQTYGVMKELMAHHVHTFGLIMGGSNRSAEAQKLANGVNILVA
TPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQ
TRKVEDLARISLKKEPLYVGVDDNKDKATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKK
LMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAAR
GLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVP
LSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNLP
MVALSFGFKVPPFVDLNVHSSKGAKLQKRGGGGGFGYQKSSFHKSKIFKHVNKGKGDKRQ
FSR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctacagatgaagcttcttcggaagaaaattcagaaaagaagtgaaaagaac
aaacagcgcaaactgttgaagtcacagacagaagaagaagagacagtaaacgccaacgga
ctaaaggagtcctgtgagaatccagagactgaaaacaaaccagaggagaagaagactgaa
aaaccaacagaggggaccacaacagaagaaacatccctaaagaagaagaagaagaaaaag
aagagaaaagctgttgacacagctgagtcacctgctgaaaagaagaccaaaacagtgaaa
gacgaagaagaggatgaggtggaagatgagggaacaacagcagatgaggatggagaaaag
tctacagaaatgccagaggaagctgcagatgaaaaagagggagacgataatgatgatgaa
gaagaggatgataaagacaaagatgaagacgatgaggaggaagatatgcctgagttaccc
tcaggattgacaggggcgtttgaggacacgtcgtttgcctctctcgctgagctggtgagt
gagaacacgctgaaagctgtgaaggacatgggatttacacacatgacagagatccagcac
aaaagtattcgtcctctgctggagggaagggatgttttggctgcagccaaaacaggaagt
ggtaaaacattggctttcctcatcccgtctatagaactaatctacaaactcaagttcatg
cctagaaacggcactggcgttgtgatcctgtcccccactcgtgagttggcgatgcagaca
tatggcgtgatgaaggaactgatggctcatcatgttcacacctttggtttgatcatgggt
ggcagcaaccgctcggcagaggctcaaaaactcgccaatggagtcaacatcctggtggcc
acacctggccgtctgctggaccatcttcagaacactcctggtttcatgttcaagaacctg
cagtgtctgatcattgatgaagccgatcgaatcctggaggttgggtttgaggaggagctg
aagcagatcatcaaactgctgccaaagaaaagacagaccatgctgttttcagccactcag
acccgtaaagttgaggacttggcccgaatctccctgaagaaggagcctctgtacgttggt
gtggatgacaacaaggataaagccaccgtagacggtctggagcagggttatgttgtatgc
ccgtcagagaagcgtttcctcttactcttcacctttctgaagaagaaccggaagaagaag
ctgatggttttcttctcttcctgcatgtcggtgaaatatcactacgagctgctcaactac
attgacctgcctgtgatggccatccatggtaaacagaagcagaccaaacgtaccaccacg
tttttccagttctgtaacgccgactcaggaatcctgctgtgtactgatgtggcagctcga
ggcctcgacatccctgaggtggactggatcgtccagtacgaccctccagatgaccccaag
gagtacatccacagggtgggcagaacagccagaggcatcaacggcagaggacacgctctc
ctcatcctccgaccagaggagctcggcttcctccgattcctcaaacaggcgaaggtccca
ttgagtgaatttgaattttcttggagtaaaatctctgatatccagtcccagctggagaag
ctgattgagaagaactactatctccataaatcagctcaggaggcctacaagtcatacgtg
agggcctacgactcccactcactcaaacagatctacagcgtcaacaccctaaacctcccc
atggtggcgctgtctttcggcttcaaagttcctccgtttgttgatctgaacgtacacagc
agtaaaggagcaaagctgcagaagcgaggaggtggaggcggttttggatatcagaagtcc
agctttcacaaatcaaaaatctttaaacacgtcaacaaaggaaaaggcgacaagaggcag
ttttcccgctga
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