Corynebacterium ulcerans 0102: CULC0102_1490
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Entry
CULC0102_1490 CDS
T02171
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cue
Corynebacterium ulcerans 0102
Pathway
cue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CULC0102_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cue03019
]
CULC0102_1490
Messenger RNA biogenesis [BR:
cue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CULC0102_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
BAM27689
LinkDB
All DBs
Position
complement(1597793..1599844)
Genome browser
AA seq
683 aa
AA seq
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MTEPRNRSRKVTRKAGPPETTEAPAFQAPDASVEVSAKAEAEKKTSGEGSSNQDASAKGN
RGRSNSGRAGNGTRNGRSRRGGNPQNNKSNRGRRNVVKSMQGADLTERLPEPPKAPKNGL
RIYALGGISEIGRNMTVFEYNNKMLLVDCGVLFPSSGEPGVDLILPDFGPIEDKLDKVEA
LVVTHGHEDHIGAIPWLLKLRPDLPIYASKFTLALIAAKCREHRQRPKLIEVNEKSDINR
GPFNIRFWAVNHSIPDCLGLAIKTGAGLVIHTGDIKLDQTPTDGRPTDLPALSRFGDEGV
DLMLCDSTNATTPGVSGSEADIAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASG
RKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVMLITTGTQGEPMAALS
RMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSRDAKVHTSGHG
YSGELLFLYNAARPVNAMPVHGEWRHLRANKELAISTGVERDRVVLAQNGVVVDLVDGRA
RVVGQIQIGNLYVDGVTMGDIDAGVLEERTSLGEGGLIAITAVIDNRTGRLLERPTVQAK
GFSEDAVAMMPEVTELVENTMTDLAGEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMPT
VIPTTQTQVEADEEEIRATRESL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccacgtaaccgttctcgaaaggttactcgtaaagctggtccgccggagact
actgaggcaccagctttccaagcccctgacgcatctgtagaggtatctgctaaagctgag
gcggagaagaaaacttcaggcgaaggttcttccaatcaagatgctagcgctaagggcaat
cgtggccgctccaactctggacgagctggaaacggaacacgcaatggtcgttcacgccgt
ggcggcaatcctcagaataataagagcaaccgaggccgtcgtaacgtggttaaatccatg
caaggtgcggatctgaccgagcgtcttccagagccccccaaggctcctaagaatgggcta
cgtatctacgctcttggtggcatttctgaaattggtcgtaatatgaccgtttttgagtac
aacaacaaaatgttgttggttgactgcggtgttcttttcccctcgtctggtgagccaggc
gtggatttgatcttgcctgattttggtcccatcgaagacaaactagacaaggtcgaggca
ctcgttgttactcacgggcatgaggaccacattggagctattccgtggttgctgaagttg
cgtccagacctacctatctacgcttctaaatttacgttggctcttatcgctgcaaagtgt
cgtgagcaccgtcagcgtcctaagctgatcgaggtaaatgagaagtcggatattaaccgt
ggaccttttaatattcgtttctgggcagttaaccactcgatcccggattgcttaggtctt
gccattaagactggcgcaggtttggtcatccataccggtgacatcaagctcgaccagacc
ccaacagacgggcgtcctaccgatcttcctgcactgtctcgctttggtgatgagggcgtt
gacctcatgctctgtgactccaccaatgcaactacgccaggcgtttcgggatccgaagcc
gatattgcgccaactctgaagcgccttgtcggtgacgcaaaacaacgcgttatcctagcg
tcgtttgcttccaacgtctaccgcgttcaggctgcagtcgatgcagcagtagcctcgggt
cgtaaggttgcattcaacgggcgttccatgattcgaaacatggaaatcgcggaaaagatg
ggttacctgaaggctcctcgcggaaccattgtcagcatggatgatgctgcaaagatggcg
ccgcacaaggttatgctcatcaccacgggaacgcagggtgagcccatggctgctttgtcg
cgcatggcgcgacgtgagcatcgccagatcacggttcgcgatggcgatctgattattctt
tcttcgtccttggtacctggtaacgaggaagctgtgttcggcgttattaatatgctggcg
cagattggtgcgaccgttgtgacgagccgcgatgccaaggtccatacctccggtcacggc
tactccggtgagcttttgttcctctacaacgctgctcgtccagtgaacgctatgccggtg
cacggagagtggcgccacttgcgggccaacaaggaactggcaatctccactggcgtggag
cgcgatcgtgtagttcttgcacaaaatggtgttgtcgtggacctcgttgacggacgagct
cgggtggtcgggcaaatccagatcggtaacctctacgtggatggtgtcaccatgggtgat
attgacgcgggggttctggaggagcgtacttccctaggtgaaggcggtctgatcgcaatc
acagctgtgattgataaccggaccggaaggttgctagagcgtcctactgttcaggccaag
ggcttctctgaagatgctgttgccatgatgcctgaagtcaccgagttggtagaaaacacc
atgactgacttggctggggaaggggagaatgacccctaccgtatggttcagcaactgcgt
cgtcgtgtctctcgtttcgtagagcaaaagtggcgtcgtaagccaatgattatgcctacc
gttatcccgacgactcagactcaggtggaagcggacgaagaggagattcgcgcaacgcgc
gaaagcctataa
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