Cupriavidus necator NH9: BJN34_16865
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Entry
BJN34_16865 CDS
T05121
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cuh
Cupriavidus necator NH9
Brite
KEGG Orthology (KO) [BR:
cuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuh03016
]
BJN34_16865
Enzymes [BR:
cuh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BJN34_16865
Transfer RNA biogenesis [BR:
cuh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJN34_16865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AQV95553
UniProt:
A0A1U9USC2
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All DBs
Position
1:complement(3663095..3665209)
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AA seq
704 aa
AA seq
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MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAIELVRQTGDM
VAEIDLDFLWECAPEAEFGFAELAAEYYGAEPGAVQQAALAMALHGSPVYFRRKGRGRYQ
RAPEDQLKAALAALERKRQQALVQAEYEEQLKALTLPETFRNKVLQLLFKPDKNSLEYKA
MDAACTALGMSPMRLMVAAGGVASARALHEAKFLAECFPKGTGFPDNDVPEPPTDLPVAD
VEAFSIDDVTTTEIDDALSVTRLPDGKLRIGIHIAAPALGIRRGEPLDAVARQRLSTVYF
PGDKITMLPDAVVERYTLQEGRQCPALSLYVTVDPTVWLITGSETRAEMVPIAANLRHNL
LDEVITEASLSEGTGDYPFRDALTQLWHFAGYLYDERQKARLASGLRPETHNRADFNFYL
DDQADGSQRVRIEQRKRGSPLDKIVAEMMILANSTWGKLLADNGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYADHQSTMERYWCLRWLKQENRERLVASVLKEGAVRFTEIPLVTRVPE
LMQAQRGTQVLLEIGETDEITLEVSCRVLEIFAGEGEVPEEELESDEEAAELSAEAAAEA
AAEDAAEQAAGVSAEAPDETPAEAGDDDTGEASEERDTGAPAAG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgaaatccgcgccggcaccgtgctgaaccagcag
ggcgaggcttaccaggtggaactgccggccggcaagcgcaccaaggtcaagtcgcgcgac
gtgctgctgcagttcgcgcagccgtcggcgatcgagctggtgcgccagaccggcgacatg
gtggccgagatcgacctggacttcctgtgggaatgcgcgcccgaggcggagttcggcttt
gccgaactggccgccgagtactacggcgccgaacccggcgcggtgcagcaggccgcgctg
gcgatggcgctgcacggcagcccggtgtacttccgccgcaaggggcgcgggcgctaccag
cgtgcgcccgaagaccagctcaaggcggcgctggccgcgctcgagcgcaagcgccagcag
gcgctggtgcaggccgaatatgaagaacagctcaaggcgctgacgctgcccgagacgttc
cgcaacaaggtgctgcaactgctgttcaagccggacaagaacagcctggaatacaaggcc
atggacgccgcctgcaccgcgctgggcatgagcccgatgcggctgatggtggccgctggc
ggcgtggccagtgcgcgcgcgctgcatgaggccaagttcctggccgagtgcttccccaag
ggcacgggctttccggacaatgacgtgcccgagccgcccaccgacctgccggtggccgac
gtggaggcattctccatcgacgacgtcaccaccaccgagatcgacgacgcgctgtccgtg
acccggctgcccgacggcaagctgcgcatcggcattcacattgccgcgcccgcgctgggc
atccgccgcggcgagccgctcgacgccgtcgcgcgccagcgcctgtccacggtctacttc
cccggcgacaagatcaccatgctgcccgatgccgtggtcgagcgctacacgctgcaggaa
gggcgccagtgcccggcgctgtcgctgtatgtgaccgtggacccgaccgtgtggctgatc
acgggcagcgagacccgtgccgagatggtgccgatcgccgccaacctgcgccacaacctg
ctggacgaggtgatcaccgaggcctcgctgtctgaaggcaccggcgactacccgttccgc
gacgcgctgacgcagttgtggcacttcgccggctacctgtacgacgagcgccagaaggcg
cgcctggccagcggcctgcgccccgaaacgcataaccgcgcggacttcaacttctacctc
gacgaccaggccgacggcagccagcgcgtgcgcatcgagcagcgcaagcgcggttcgccg
ctggacaagatcgtggccgagatgatgatcctggccaacagcacctggggcaagctgctg
gccgacaacggcgtgccgggcatctaccgcacgcagaaggcgtggggcatgcaccgcacc
cgcatgcagacctacccggcgccgcacgagggcctgggcgtggcgcagtacgcgtggagc
acctcgccgctgcgccgctatgtcgacctggtcaaccagtggcagatcctggcggtggcc
cagcatggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgacctcctc
gccgcggtggcggactttgaaggcacctacgccgcctatgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctcaagcaggaaaaccgcgagcgcctggtggcctcg
gtgctcaaggaaggcgcggtgcgctttaccgagatcccgctggtcacgcgcgtgcccgaa
ctgatgcaggcgcagcgcggcacccaggtgctgctggagatcggcgagaccgacgagatc
acgctggaagtgtcctgccgggtgctggaaatctttgccggtgaaggcgaggtgcccgag
gaagagctcgaaagcgacgaggaagccgcagagttgtccgccgaagccgctgccgaggcg
gcggccgaggatgccgccgagcaggccgcgggcgtgtcggccgaggcgccggacgagacg
ccggccgaagccggcgacgacgataccggcgaggcgtcggaagagcgcgacaccggcgcg
ccggcggccggctga
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