Campylobacter upsaliensis: CUP3940_0710
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Entry
CUP3940_0710 CDS
T06758
Symbol
miaB
Name
(GenBank) isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cux
Campylobacter upsaliensis
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cux03016
]
CUP3940_0710 (miaB)
Enzymes [BR:
cux01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CUP3940_0710 (miaB)
Transfer RNA biogenesis [BR:
cux03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CUP3940_0710 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QKF87667
LinkDB
All DBs
Position
705262..706563
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AA seq
433 aa
AA seq
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MSAKKLFIQTLGCAMNVRDSEHIIAELTQKENYSLTEDIKEADLILINTCSVREKPVHKL
FSEVGGFEKVKKKGAKIGVCGCTASHLGEEIFRRAPYVDFVLGARNISKITQAVKTPKFV
GVDLDYDESEFAFSDFRNSPYKSYINISIGCDKHCTYCIVPHTRGDEISIPFELIYNEAK
KAVEKGAKEIFLLGQNVNNYGKRFRNAHKKMDFSDLLNALSEIENLRRIRFTSPHPLHMD
DKFLQTFSQNEKICKAMHMPLQSGSSEILKAMKRGYSKEWYLDRALKLRELCKDVSISTD
IIVAFPGESEKDFEDTLDVLEKVRFEQIFSFKYSKRPLTKAATMQGQIPEDIASRRLSFL
QNRHAEILDEITKKQENQTFEVLFEELRANNAVAGRTDNNFLVQIQGSEEMLGTMKQVKI
TNAKRMVLYGEIV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgctaagaaactatttatccagactttgggttgcgcgatgaatgtgagggatagt
gagcatatcatcgctgaattaacgcaaaaggagaattatagcctcacagaggacataaag
gaggcggatttaattctcattaacacttgttccgtgcgtgaaaaacccgtgcataagctt
ttctcagaagtcggtggctttgaaaaagttaagaaaaaaggtgctaaaataggtgtttgt
ggttgcacggcttcgcatttaggagaggaaattttccgtcgtgcgccttatgtggatttt
gttttgggagctagaaatatttctaaaatcactcaagcggtcaaaactcccaaatttgtc
ggagttgatttagattatgatgaaagtgagtttgcttttagcgattttagaaatagtcct
tacaaatcctacattaatatttccataggttgcgataaacattgcacttattgcatagtc
ccacatactagaggagatgaaatttctatcccttttgaattgatttataatgaagctaaa
aaggcggtagaaaagggtgcgaaagagatatttttacttgggcaaaatgtcaataattat
ggcaaaagatttagaaacgctcataaaaaaatggatttttccgatttgctaaacgcttta
agtgagattgagaatttaagacgcattcgttttacaagtccgcatcctttacatatggat
gataaattcttgcaaacttttagtcaaaatgaaaaaatttgcaaagctatgcatatgcct
ttgcaaagtggctcaagtgaaattttaaaagcgatgaaaagaggttatagtaaagagtgg
tatttagatagggctttaaagcttagagagctctgcaaagatgtcagcatttcaacagat
attattgtagcatttccgggagagagtgagaaggactttgaagacactttagatgttttg
gaaaaggtgcgttttgagcaaattttttcttttaaatactccaaacgccccttgactaaa
gccgccacaatgcagggtcaaatcccagaagatattgcttcgaggaggttaagcttttta
caaaatcgccacgcagaaattttagatgaaatcacaaaaaagcaggaaaatcaaactttt
gaagtgctttttgaagagctaagggcaaataatgccgtagcaggtcgcacggataataat
tttttagttcaaattcaaggcagcgaagaaatgctaggcacaatgaaacaagtgaaaatc
acaaacgcaaaacgcatggtgctttatggggaaattgtttaa
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