KEGG   Campylobacter upsaliensis: CUP3940_1575
Entry
CUP3940_1575      CDS       T06758                                 
Symbol
hsdR4
Name
(GenBank) type I restriction/modification system, restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cux  Campylobacter upsaliensis
Brite
KEGG Orthology (KO) [BR:cux00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cux02048]
    CUP3940_1575 (hsdR4)
Enzymes [BR:cux01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CUP3940_1575 (hsdR4)
Prokaryotic defense system [BR:cux02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CUP3940_1575 (hsdR4)
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C HSDR_N ResIII DEAD SNF2-rel_dom Rep-A_N DUF1477
Other DBs
NCBI-ProteinID: QKF88478
LinkDB
Position
1556757..1559789
AA seq 1010 aa
MKSLKLLAQNTTSTIAVEWTPSKKVDSSYQSEAQLEKELIATLQAQGYGYAPISDEKSLE
SNLRTKLEELNSTTLSDTEWRRFFSQVLSRANASIVEKSVLIQEDYIQPLERDNGSIINF
KLIDKADIHKNSLQVINQYEATTPTRSHRYDVSILVNGLPLVHIELKRRGVSLKEAFNQI
NRYGRESFFSGNALFEFVQIFVISNGTQSKYYSNTTRDFHIKTQQGIKTTKTSNSFEFTS
YFSDEKNTIIDDLIDFAKTFFARHTLLNILCRYCVLDVDRKLLVLRPYQIAACEKILQQI
AISYHNKFYEKSSEQKSGGYIWHTTGSGKTLTSFKTAQLVSKIPEIAKVLFVVDRKDLDY
QTMREYDRFQKGAATGSKSTKELQSRLNSTDKNHKIIITTIQKLSRFIAQAEKDHTIFNE
HIVMIFDECHRSQFGQMQKDIAKAFKKLYLFGFTGTPIFAANALGFETTQRVFGECLHRY
TIIHAIRDHNVLPFRVSYHTTAKLKSQPIQDEQVPAIDTEEILLAKERISHITRYILEHF
TTQTKRSSTYTINGKHTKGFNALFATQSIPMAMRYYEEFQSQQASLPESQRLKVGIIYSY
APNDEQEEESSEDTTSLPKSQRDFLDATINDYNAIFACRFDSSADNFHNYYKDFSLKLKN
RELDLAIVVNMFLTGFDATTLNTLYVDKSLRYHGLLQAYSRTNRILNSVKSFGNIIAFRD
LQRNTDDALALFSDENAKGIVFLRSLEEYLHGYTDEKGQKHKGYNELTKELTDKFPLESF
RQATLKQSDKKHFLALFGELLKLRNILENFDNFSDPLNERDKQDYQSHYISTYEELRKDK
DDKESNLDEVEFEVELLAQVEVSIEYILELIAKYHKDQATNYEPILKLLDSSLSLRSKKE
LFLRFIDSLHTQSNVEKDFRAYIKTHKNNALQDIINALNLDPKKTKEFMQDSFERGELRD
YGRAFGEILPPSPLFGKGAEQTHKIREKALEKLQAFFELFKGLDMSNKEQ
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgaaaagtctaaaactcctagcccaaaacacgacctccaccatagccgtagaatggacc
ccaagtaaaaaagtggattctagctatcaaagtgaagcccagcttgaaaaagagcttatc
gctactctccaagcccaaggctatggatacgcccctatcagcgatgaaaaatccctagaa
tccaatctccgcacaaagctagaggagctaaattccaccaccctaagcgacacagagtgg
cggcgatttttctcccaagtgctctctagggcaaatgcctctatcgtggaaaaaagcgtg
ctaatccaagaggactatatccagcccctagagcgtgataatggcagcattattaacttc
aagctcatcgacaaagccgacatacataaaaactccttgcaagttatcaatcagtatgaa
gctaccacgccgacacgctctcaccgctatgatgtaagcattttagtcaatggactacct
ttagtgcatatcgagctaaaacgccgcggcgtgagtctcaaagaagctttcaatcaaatc
aaccgctacggacgggagagcttttttagcggaaacgcgctctttgaatttgtgcagatt
tttgtcattagcaatggcacgcaaagcaagtattactccaacaccacgcgcgattttcat
atcaaaacacagcaaggcataaaaacgaccaaaacttccaatagctttgaatttaccagc
tattttagcgatgagaaaaacaccattatagatgatttaatagactttgcaaagaccttt
tttgctaggcacacactgctaaatatcctctgccgctactgcgtgctagatgtggataga
aagctcctagtcctgcgcccttaccaaatcgccgcgtgtgaaaagatcttgcagcaaatc
gccataagctaccacaacaaattctacgaaaaatcaagcgaacaaaaaagcggcggctat
atctggcacaccacaggcagcggcaaaactttgaccagcttcaaaaccgcccagctagtg
agcaagatcccagaaatcgctaaagtgctttttgtcgtggatagaaaagatctagactat
caaacaatgcgtgaatacgatagattccaaaagggtgctgccaccgggagcaaaagcacc
aaagagctacaatcacgccttaacagcacagataaaaaccacaaaatcatcatcaccacg
atccaaaagctctcccgcttcatcgcccaagcagaaaaagaccatacgatctttaacgaa
cacattgtgatgatttttgatgagtgccatagaagtcaatttgggcaaatgcaaaaagac
atcgccaaagcctttaaaaagctctatctctttggctttacaggcacgccaatttttgcc
gcaaacgcgctaggttttgagacgacacagcgagtctttggcgagtgcttgcaccgctac
acgataatccacgccatacgcgaccataatgtcctgcctttccgcgtgagctaccacacc
acagctaagctaaagtcccagcctatccaagatgagcaagtcccagccatagacacagaa
gagatcctcctagccaaagagcgtatttcccacatcactcgctatatcttagagcatttt
accacccagaccaagcgcagctccacctacaccataaatggcaagcacacaaaaggcttt
aacgctctttttgccacccagtctatccctatggctatgcgatattatgaagagtttcag
tcccagcaagccagcctgccagaatctcaaaggctaaaagtaggcatcatctacagctat
gccccaaacgatgagcaagaagaagagagcagcgaggacaccacctccctgcctaagtcc
cagcgcgattttttagacgccacgataaacgactataacgcaatatttgcgtgcagattt
gatagctccgcggataatttccacaactactacaaagacttctccctaaagcttaaaaac
cgcgagctagacctagccatcgtagtcaatatgtttctaacaggctttgacgccaccacg
ctaaataccctttatgtcgataagtccttacgctatcacggacttttacaagcctactcc
cgcactaatagaatcctaaattccgtcaaaagctttggcaatatcatagcctttagagac
ttgcagagaaacaccgatgacgccctagcccttttcagcgatgagaacgctaagggcata
gtctttctaagaagcctagaagaatatttgcacggctacaccgatgaaaagggacaaaag
cataaaggctacaacgagcttacaaaagagcttacagacaaattcccgcttgaaagcttc
cgccaagccacgctaaagcagagcgacaaaaagcactttctagccctatttggagagctt
ttaaagctgcgtaatatccttgaaaattttgataattttagcgacccactaaatgaacgc
gataagcaagattatcaaagccactacataagcacctatgaagagctacgcaaagacaaa
gatgacaaagaaagcaacctagatgaagtagaatttgaagtcgagcttctagctcaagta
gaagtaagtatagaatatatcctagagcttatcgccaaatatcacaaagaccaagccacc
aactacgagcctatactcaagctactagattctagtctaagcctacggagcaaaaaggag
ctttttttacgcttcatagactccctacacacacaaagcaatgtggaaaaagactttaga
gcctacatcaaaacgcataaaaataacgccttgcaagacatcataaacgccctaaattta
gaccccaaaaagactaaagaatttatgcaagatagctttgagcgaggtgagctaagggac
tatgggagagcctttggcgagattttgcctcctagcccactctttggcaaaggtgcagag
cagacgcataaaatccgcgaaaaagccctagaaaagctacaagcatttttcgagcttttt
aagggactagatatgagcaacaaggagcaatga

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