Corynebacterium ulcerans 05146: Cul05146_1407
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Entry
Cul05146_1407 CDS
T03420
Name
(GenBank) Ribonuclease j Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cuz
Corynebacterium ulcerans 05146
Pathway
cuz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cul05146_1407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuz03019
]
Cul05146_1407
Messenger RNA biogenesis [BR:
cuz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cul05146_1407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AIU91969
UniProt:
A0A809RFT1
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All DBs
Position
complement(1466330..1468381)
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AA seq
683 aa
AA seq
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MTEPRNRSRKVTRKAGPPETTEAPAFQAPDASVEVSAKAEAEKKTSGEGSSNQDASAKGN
RGRSNSGRAGNGTRNGRSRRGGNPQNNKSNRGRRNVVKSMQGADLTERLPEPPKAPKNGL
RIYALGGISEIGRNMTVFEYNNKMLLVDCGVLFPSSGEPGVDLILPDFGPIEDKLDKVEA
LVVTHGHEDHIGAIPWLLKLRPDLPIYASKFTLALIAAKCREHRQRPKLIEVNEKSDINR
GPFNIRFWAVNHSIPDCLGLAIKTGAGLVIHTGDIKLDQTPTDGRPTDLPALSRFGDEGV
DLMLCDSTNATTPGVSGSEADIAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASG
RKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVMLITTGTQGEPMAALS
RMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSRDAKVHTSGHG
YSGELLFLYNAARPVNAMPVHGEWRHLRANKELAISTGVERDRVVLAQNGVVVDLVDGRA
RVVGQIQIGNLYVDGVTMGDIDAGVLEERTSLGEGGLIAITAVIDNRTGRLLERPTVQAK
GFSEDAVAMMPEVTELVENTMTDLAGEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMPT
VIPTTQTQVEADEEEIRATRESL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccacgtaaccgttctcgaaaggttactcgtaaagctggtccgccggagact
actgaggcaccagctttccaagcccctgacgcatctgtagaggtatctgctaaagctgag
gcggagaagaaaacttcaggcgaaggttcttccaatcaagatgctagcgctaagggcaat
cgtggccgctccaactctggacgagctggaaacggaacacgcaatggtcgttcacgccgt
ggcggcaatcctcagaataataagagcaaccgaggccgtcgtaacgtggttaaatccatg
caaggtgcggatctgaccgagcgtcttccagagccccccaaggctcctaagaatgggcta
cgtatctacgctcttggtggcatttctgaaattggtcgtaatatgaccgtttttgagtac
aacaacaaaatgttgttggttgactgcggtgttcttttcccctcgtctggtgagccaggc
gtggatttgatcttgcctgattttggtcccatcgaagacaaactagacaaggtcgaggca
ctcgttgttactcacgggcatgaggaccacattggagctattccgtggttgctgaagttg
cgtccagacctacctatctacgcttctaaatttacgttggctcttatcgctgcaaagtgt
cgtgagcaccgtcagcgtcctaagctgatcgaggtaaatgagaagtcggatattaaccgt
ggaccttttaatattcgtttctgggcagttaaccactcgatcccggattgcttaggtctt
gccattaagactggcgcaggtttggtcatccataccggtgacatcaagctcgaccagacc
ccaacagacgggcgtcctaccgatcttcctgcactgtctcgctttggtgatgagggcgtt
gacctcatgctctgtgactccaccaatgcaactacgccaggcgtttcgggatccgaagcc
gatattgcgccaactctgaagcgccttgtcggtgacgcaaaacaacgcgttatcctagcg
tcgtttgcttccaacgtctaccgcgttcaggctgcagtcgatgcagcagtagcctcgggt
cgtaaggttgcattcaacgggcgttccatgattcgaaacatggaaatcgcggaaaagatg
ggttacctgaaggctcctcgcggaaccattgtcagcatggatgatgctgcaaagatggcg
ccgcacaaggttatgctcatcaccacgggaacgcagggtgagcccatggctgctttgtcg
cgcatggcgcgacgtgagcatcgccagatcacggttcgcgatggcgatctgattattctt
tcttcgtccttggtacctggtaacgaggaagctgtgttcggcgttattaatatgctggcg
cagattggtgcgaccgttgtgacgagccgcgatgccaaggtccatacctccggtcacggc
tactccggtgagcttttgttcctctacaacgctgctcgtccagtgaacgctatgccggtg
cacggagagtggcgccacttgcgggccaacaaggaactggcaatctccactggcgtggag
cgcgatcgtgtagttcttgcacaaaatggtgttgtcgtggacctcgttgacggacgagct
cgggtggtcgggcaaatccagatcggtaacctctacgtggatggtgtcaccatgggtgat
attgacgcgggggttctggaggagcgtacttccctaggtgaaggcggtctgatcgcaatc
acagctgtgattgataaccggaccggaaggttgctagagcgtcctactgttcaggccaag
ggcttctctgaagatgctgttgccatgatgcctgaagtcaccgagttggtagaaaacacc
atgactgacttggctggggaaggggagaatgacccctaccgtatggttcagcaactgcgt
cgtcgtgtctctcgtttcgtagagcaaaagtggcgtcgtaagccaatgattatgcctacc
gttatcccgacgactcagactcaggtggaagcggacgaagaggagattcgcgcaacgcgc
gaaagcctataa
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