Corynebacterium variabile: CVAR_0356
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Entry
CVAR_0356 CDS
T01594
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cva
Corynebacterium variabile
Pathway
cva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVAR_0356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_0356
Enzymes [BR:
cva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CVAR_0356
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CVAR_0356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEK35704
UniProt:
G0HA00
LinkDB
All DBs
Position
423777..424658
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AA seq
293 aa
AA seq
DB search
MLRIATANVNGIRAAQRRGFGDWLDARDCDVIAVQEVRAQPDKIPEDAFGNYHVALETGN
IPGRNGVAVLTKTPPVAVRTWSDGSDRVPLPRKLRPFIPQGRYIEVDLADAPVTVACLYL
PKGGLPAEMQRPERMREAPDGGARYERKMGFLAGFGRYLTATRRAALAEGREFLLMGDMN
IAHTRHDLTHWRRNQSHDGFLPEEREWFDRQLSPRTLVDVVRSLHPDEDGPYSWWSWAGQ
SFAKDAGWRIDYHLATPRLARTATSAGVDRDFRGMRLSDHSPVVVDYDDSAIG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcatcgccaccgccaacgtcaacgggatccgcgccgcgcaacgccgggggttc
ggcgactggctggacgcacgtgactgcgacgtcatcgcagttcaggaggtccgggcacag
cccgacaagatcccggaggacgccttcgggaactaccacgtcgccctggagaccgggaat
attccgggacgcaacggcgtcgcggtgctcacgaagacgccaccggtcgcggtgcggacg
tggagcgacggatcagaccgcgtcccgctgccccggaagctacgtccgttcatcccgcag
ggacgctacatcgaggtcgacctcgcggatgctcccgtcacggtcgcctgcctctacctg
cccaaaggcggactgccggccgagatgcagcgtcctgaacggatgcgtgaggcacccgac
ggaggtgcccgctacgagcgcaagatggggttcctcgccggcttcggacgctatctcacg
gccacgcgccgggcagcgctcgcggagggcagggagttcctgctcatgggggacatgaac
atcgcccacacccgccacgacctcacccactggcggcgcaaccagagccacgacggcttc
ctccccgaggaacgcgagtggttcgaccggcagctctcgccgcgaaccctggtcgatgtc
gtccggtcactgcacccggacgaggacggaccctattcgtggtggtcatgggccggacag
tccttcgcgaaggacgccgggtggcgcatcgactaccacctcgccacaccccgtctggcg
cgcaccgcaacatctgcgggggtggaccgggacttccgcggtatgagactctcggaccac
tcgccggtggtcgtggactacgacgattcagcgatcgggtag
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