Corynebacterium variabile: CVAR_0953
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Entry
CVAR_0953 CDS
T01594
Symbol
gabP1
Name
(GenBank) 4-amino butyrate transport carrier
KO
K11735
GABA permease
Organism
cva
Corynebacterium variabile
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cva02000
]
CVAR_0953 (gabP1)
Transporters [BR:
cva02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CVAR_0953 (gabP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease
AA_permease_2
Motif
Other DBs
NCBI-ProteinID:
AEK36307
UniProt:
G0HD30
LinkDB
All DBs
Position
1086751..1088238
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AA seq
495 aa
AA seq
DB search
MAIATGRETEPSGNPDRPGRGNTAGSEQDAGGGTTVRKDKLKSRHITMITLGGIMGSALF
IGSGNVIAKAGPAAVMSYAIGGVLVFLAMVLLGEMAARRPAVGSFMEYSRINIGDGAAYI
VGWLYWYFWVGVLAYDAVVGGAILHGWFPFLDEWAWGLLMLGLFIAINLRSVKTFGEVEF
WLASIKVVAVIIFLVVGAMLAFGLWPGDDGGARFSNLTDHGGLAPNGMGSVVSGVAIVIF
AYFGTEVAVMAAAESENPGKGIRQATKTVIWRILLFFVGSVAIIVTVIPWDSLPAATDAA
SGPFAAVIGELGVPGASMIMELVVFAAVLSVMNAGLYAASRMLSSMAEQKYAPEITAKRN
AKGVPVVAVVLSTIGGVVGCLVNFLFPDAGLFDFIMSSTGLVALFVYAFIALSNWNMRRK
MTPEETAAVATKLRVPLFPLSNIIVLVGVAAVVVVMLIDGSTAEVWSSVVATAFIGVLWP
VVKRRKRAAEKEAAA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgccacaggacgggaaacagaaccgtccggcaatccggaccgtcccggacgc
gggaacaccgccggaagcgagcaggacgccggaggcgggaccaccgtccgcaaggacaaa
ctgaagtcccggcacatcaccatgatcaccctcggcgggatcatggggtccgcactgttc
atcggttcgggaaatgtgatcgccaaggcaggccccgccgccgtgatgtcctatgcgatc
ggcggcgtcctcgtcttcctggcgatggtgctgctcggcgagatggccgcccgccgcccc
gccgtcggctccttcatggagtactcgcggatcaacatcggcgacggcgcggcctacatc
gtcggctggctgtactggtacttctgggtcggtgtcctggcctatgacgccgtcgtcgga
ggggcgatcctccacggctggttccccttcctggacgaatgggcctggggcctgctgatg
ctcggcctgttcatcgcgatcaacctgcgcagcgtgaagaccttcggggaggtcgagttc
tggctggcgagcatcaaggtagtcgccgtgatcatcttcctcgtcgtcggcgcgatgctc
gccttcggactgtggcccggcgacgacggcggggcgcggttctccaacctcaccgaccac
ggtggcctggcgccgaacggtatgggttccgtggtctccggtgtggcgatcgtcatcttc
gcctacttcggtaccgaggtcgccgtgatggctgcggcggagtcggagaacccgggtaag
ggcatccgacaggccaccaagacggtcatctggcgcatcctgctcttcttcgtcggttct
gtcgcgatcatcgtcaccgtgattccgtgggattcgctgccggctgccactgatgctgcg
tccggtcctttcgcagcggtgatcggtgaactgggtgttcccggtgcctctatgatcatg
gaactcgtggtcttcgccgcggtgctgtcggtgatgaacgccggactgtacgcggcgtcc
cggatgctgtcgtcgatggcggagcagaagtacgcgccggagatcaccgccaagcgcaac
gccaagggcgtgccggtggtcgctgtggtgctctccacgatcggcggtgtagtcggctgc
ctggtgaacttcctgttcccggatgccggactcttcgacttcatcatgagctccaccgga
ctcgtggcgctgttcgtctacgcgttcatcgccctgtcgaactggaacatgcgacgcaag
atgaccccggaggagaccgcggcggtggccacgaagctgcgggttccgctgtttccgctg
tccaacatcatcgtcctggtaggagtggcggctgtggtggttgtgatgctgatcgacggt
tcgaccgccgaagtgtggtcgagcgtggtcgccaccgcgttcatcggggtgctgtggcct
gtcgtcaagcggcgcaagcgcgcggccgagaaggaggctgcggcgtga
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