Corynebacterium variabile: CVAR_1925
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Entry
CVAR_1925 CDS
T01594
Symbol
rnhA
Name
(GenBank) Ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVAR_1925 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cva03032
]
CVAR_1925 (rnhA)
Enzymes [BR:
cva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
CVAR_1925 (rnhA)
DNA replication proteins [BR:
cva03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
CVAR_1925 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
CVAR_1925 (rnhA)
Elongation factors (archaeal)
CVAR_1925 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
DUF4440
DUF188
Motif
Other DBs
NCBI-ProteinID:
AEK37278
UniProt:
G0HFM5
LinkDB
All DBs
Position
2208242..2208985
Genome browser
AA seq
247 aa
AA seq
DB search
MGELKAVLDLLESTADAGRTDEDLLVLCDSQYVINSVTKWMPGWKKKGWKKRDGKPVLNV
DLMKAIDAAMQGRRVRFEWVKGHAGHPMNEAADQRANAAATAFQKKQAPQEGPGFDGASS
PAPAAATGVASTADAVVDRELALLSDAVRGDRELASRLLHEGMTEISATGQRYSRDDVLD
ALSPLVGFDAVDEVCAADITSSQIAPDVLLLTYTTSGVAGTVARSSLWVREGEQWTLRHH
QATPTER
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactcaaggcggtcctcgacctgctggagtccaccgcggacgccgggcgcacg
gacgaggacctcctcgtcctgtgcgactcccagtacgtcatcaactccgtgacgaagtgg
atgccgggctggaagaagaagggctggaagaagcgcgacggcaagccggtactcaatgtc
gacctgatgaaggccatcgacgccgcgatgcagggacgccgcgtccggttcgagtgggtg
aaaggccacgccggtcacccgatgaacgaggccgccgaccagcgcgcgaatgccgcggcc
accgccttccagaagaagcaggccccgcaggagggcccgggcttcgacggtgcatcctcc
cctgcgccggctgccgccaccggggtcgcctccaccgcggacgccgtggtcgaccgcgag
ctcgccctgctctccgatgcggtccgcggcgaccgggagctcgcgtcccgcctgctgcac
gaggggatgacggaaatcagcgccaccggtcagcggtactcccgcgacgacgtcctcgac
gccctgtctccgctggtcggcttcgatgccgtcgacgaggtctgtgctgccgacatcacc
tcctcacagatcgcacctgatgtgctcctcctcacctacacgacctccggggtcgccggt
accgtcgcccggagttccctctgggtccgggagggtgaacagtggacactgcgccaccac
caggcaactcccaccgaacgctga
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