Chromobacterium vaccinii: BKX93_15375
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Entry
BKX93_15375 CDS
T04565
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cvc
Chromobacterium vaccinii
Pathway
cvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKX93_15375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvc03000
]
BKX93_15375
03400 DNA repair and recombination proteins [BR:
cvc03400
]
BKX93_15375
Enzymes [BR:
cvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BKX93_15375
Transcription factors [BR:
cvc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BKX93_15375
DNA repair and recombination proteins [BR:
cvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKX93_15375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AOZ51244
UniProt:
A0A1D9LJ71
LinkDB
All DBs
Position
complement(3324777..3325949)
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AA seq
390 aa
AA seq
DB search
MASRDTRFDGRFFIAVRSTGIYCRPICPARTAKRENIAVYPSAAAAQEAGFRPCLRCRPE
AAPDSGAWRGVANSGHSHTVARALALIEQGALDDGGMAGLVDKLGVGERQLRRLFAEHVG
ASPLTVAQTRRVLLAKQLIHETRLPLTDIAFAAGFGSVRRFNEVFQQLYRRAPGELRRDA
SACQNAPGEVSLLLRYRPPYDWPDMLAQLAAHVVPGLEAIQGDVYARVFCWRGVAGTLSV
TPTRHPALLVTVRTRQWQALGDILARLRAMLDLAADPDCIERHLAQDPMLAERVAARPGL
RLLGAWSVAESVWKHETAPSDRASWLNRHGCPLPSADPAFPSLSHAFPPSPNAENDMPRA
AEPDECNPMPVPAHMDAWRPWRAYAQHYLD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttggccagtcgcgacacccgcttcgacggccgcttcttcatcgccgtgcgcagtaccggc
atctactgccgcccgatctgcccggcacgcaccgccaagcgcgagaacatcgccgtctat
ccctccgccgccgccgcgcaggaggccggctttcgcccctgcctgcgctgccgtccggaa
gccgcgcccgattccggcgcttggcgcggcgtggccaacagcgggcactcgcacaccgtg
gcgcgcgcgttggcgctgatcgagcagggcgcgttggacgatggcggcatggcagggctg
gtggacaaattgggcgtgggcgaacgccagttgcggcggctgttcgccgaacacgtcggc
gcctcgccgctgacggtggcgcaaacgcgacgggtgctgttggcgaagcaattgatccac
gaaacgcggctgccgctgaccgacatcgccttcgccgccggcttcggcagcgtgcgccgc
ttcaacgaagtattccagcagctataccgccgcgccccgggcgagctgcgccgcgatgca
tccgcttgtcaaaacgcgcctggggaagtcagcctgctgctgcgctatcggccgccttac
gattggccggacatgctggcgcaactggcggctcatgtagtcccggggcttgaagctatc
caaggagatgtctatgcccgagtcttttgctggcgcggcgtcgctggcacgctgagcgtc
acgccaacgcgacacccagcgctgcttgtgacggtacgaacccgccaatggcaagcgcta
ggggacattctggcccgcctgcgcgccatgctggacctcgccgccgacccagactgcatc
gagcgtcatctagcgcaagatccgatgcttgcagagcgtgtcgccgctcgccccggcttg
cgactgctcggcgcctggagcgtagcggagagtgtgtggaaacacgaaaccgcgcccagc
gatcgcgccagctggctgaaccggcacggatgcccattgccatccgctgatcctgccttc
ccttccctcagtcatgctttcccaccgagcccaaacgcagaaaacgacatgccccgagca
gccgaacctgatgagtgcaatcccatgcctgttccagcgcatatggatgcttggcgtcca
tggcgggcttacgcccagcactatctggattga
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