Cyprinodon variegatus (sheepshead minnow): 107086302
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Entry
107086302 CDS
T06110
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107086302 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107086302 (ctnna1)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107086302 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Peptidase_C5
GIT1_C
Motif
Other DBs
NCBI-GeneID:
107086302
NCBI-ProteinID:
XP_015232645
Ensembl:
ENSCVAG00000013536
UniProt:
A0A3Q2E4V1
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MTSINTPNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVENATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGESMRLASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLVQLKLVEDNLLKVRNAGTEQELGIQYKAL
KPEVDKLNMMAAKRQQELKDVHHKDQMAAARGVLQRNVPMLYTASCACLQHPDVAAYKAN
RDLIYKQLQHAVSGISNAAQATATEESALNQPGGAGELAYALNNFDKQIILDPVGFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKDK
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDVFKDQWEKQVRVLTDAVDDITSIDDFLSVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGVYTEKVLEATKLLTNSVMPRFTEQVESAVEALSA
NPSQPVDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDARSKTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADLCPDSSCKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNAVVSTVKASYVAS
TKYQKNKNMEALNMPAVSWRMKAPEKKPLVKREKQDDGQTNRVKRSSHKKHVNPVQALSE
FKAMDSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgactagcatcaacacacccaacatcaacttcaaatgggacccaaagagcctggagatc
cgtactctggcagtggagcgcctactggagccccttgttacccaggtcaccacgttggta
aactccagcaataaaggaccatctaacaagaagaagggacgctctaagaaggctcacgtt
ttggctgcctcagtcgagaacgccactcagaacttccttgagaagggagaaaagatcgca
aaggaaagtcagttccttaaggatgaactcaccgctgcagtggaggatgtccgcaagcaa
ggtgaatcaatgcgactggcctctggagaatttgcagaagacccctgttcctctgtgaag
agaggcaatatggtgcgagcagcccgggctcttctgtccgccgtcacacatttgttggtt
ctggcagacatgtctgatgtctataaactgctggtgcaacttaaactggtggaggacaat
ctgctgaaggtgcgaaatgctggaacagagcaagagttaggaatccagtataaggccttg
aaaccagaggtggacaagctgaacatgatggctgccaagagacagcaggagctaaaagac
gtccatcataaggaccaaatggctgcagcacggggggtgctgcaaaggaacgtccctatg
ctgtacacggcatcctgtgcctgcctgcagcaccctgacgtggcagcctacaaggctaac
cgtgacctgatctacaagcagctgcagcacgccgtttctggaatctccaacgccgcccag
gccaccgccaccgaagagtcagccctgaatcagccaggaggggcaggagagctcgcctac
gccctcaacaattttgataaacaaatcattttggatcccgtgggcttcagcgaggaacgc
tttcgtccatcgctggaagagcgccttgagagcatcatcagcggagctgctctcatggct
gactcttcatgcacacgtgacgaccgcagggaacgcattgtggccgaatgcaattcagtg
cgccaggctctgcaggacctcctctctgagtatatgggaaatgcaggaagaaaagacaag
agcgatgctctgaacacggccatcgacaggatgacaaagaagaccagagatctccgcaga
cagctgcgtaaagccgtgatggaccatgtctcagactctttcctggaaactaatgttccc
ctcctggtcctcattgaagctgccaagaatggtaacgagaaggaagtgaaagaatatgcc
caggtgtttcgtgagcacgccaacaagttgattgaggtggccaacctggcatgctccatt
tccaacaatgaagagggagtgaagctggtccgcatggcagcctctcaactggaaactcta
tgcccccaggtgattaatgctgcactggccctcgctgccaaacccaacagtaaggtggcc
caagacaatatggacgtgttcaaggatcagtgggaaaagcaggttcgcgtcctcaccgat
gctgttgatgacataacatcgattgatgacttcctgtctgtatctgagaaccacatcctg
gaggatgtgaataagtgcgtcattgcccttcaagaaaaggatgtcgacggtttggaccga
accgctggggccatccgaggccgggctgccagagttgtccatgtcgtcacttctgagatg
gacaattatgaacctggagtctacactgagaaggttctggaagctacaaagctcctcacc
aactcagtcatgccacgcttcacagaacaggtggagtctgcagtggaggccctgagtgca
aacccctcacaacctgtggatgagaacgagttcatcgatgcatcccgcctggtctacgac
ggcatccgcgacatacgcaaggctgtccttatgatccggactccagaggaattggacgac
tccgactttgagacggaagattttgatgctcgtagcaagaccagcgtgcagacggaggat
gaccaactcatcgccggccaaagtgctcgagccatcatggcgcagttgcctcaggagcag
aaggctaagattgcagagcaggtggccagcttccaggaggagaagagcaagctggatgct
gaggtatccaaatgggatgacagcggcaatgacatcattgtgctggctaagcagatgtgc
atgatcatgatggagatgacggacttcaccaggggaaaggggccactgaaaaatacttct
gatgtcatcagcgctgccaagaaaattgccgaagcgggatccagaatggacaaactgggc
cgcaccatcgctgacctttgtcccgactcttcctgtaagcaggatctgctggcctacctg
cagcgcattgccttgtactgccaccagctcaacatctgcagcaaagtcaaggctgaggtt
cagaacctgggaggagagctggttgtctctgggttggacagcgccatgtccctcatccag
gcagctaagaacctgatgaacgccgtggtgtccactgtcaaagcctcctacgtcgcctcc
accaagtaccaaaagaacaaaaacatggaggccctcaacatgccagcggtctcctggaga
atgaaagctcccgagaagaagccgctggtgaagagagagaagcaggatgacgggcagacc
aaccgagtcaagagatcctctcacaagaagcacgtcaaccctgtgcaggctctgagcgag
ttcaaagccatggatagcatctag
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