Cyprinodon variegatus (sheepshead minnow): 107087266
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Entry
107087266 CDS
T06110
Name
(RefSeq) transcription factor COE2-like
KO
K09103
early B-cell factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107087266
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107087266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
LolA_2
Motif
Other DBs
NCBI-GeneID:
107087266
NCBI-ProteinID:
XP_015234232
Ensembl:
ENSCVAG00000022588
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MFGIQEQLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQRNEHGKAFQWTLFTSD
VHVQISIPKCTQRHALCFPFFVSPLSKEQTGEKTNNGTHYKLQLLYSNGVRTEQDLYARL
IDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVIIDRFFLKF
FLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKHGRRARRLEPG
ESVENTMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLVWSELITPHAI
RVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKIIPRHPGDP
EKLAKEILLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQLQALPSSPVH
GSVMGLGSYPSQLGVSIGDPGQSSQGYIRNSSSLSPRGYPSASTPQQSSYGGSGGMTGGY
GTVPMTSLGVPGSPGFSSASPTSSPYIMPASPTIPGSSSSSSSLLPFSSFPSAAKQKSAF
APVLRPQGSPSPACPASGGNSFRAMTGLVVPPM
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggattcaggagcagctgataagagacgtgagcggattaaaagagagaactctt
ggagaggagatggatccagtccggtcgtgggtgcgtaatgttggggttgtggatgcaaac
gttgcagcgcaaaggaatgaacacggcaaagcattccaatggactttgtttacatctgat
gtccatgtccagatatctatacccaagtgtactcaacggcatgcattgtgcttccctttc
tttgtttcccctctttccaaggagcagactggagaaaagacaaataatggcactcattat
aagctacagcttctctacagtaatggggttcgcacagagcaagatctttatgcacgactt
attgactccgtcactaaacagcccatttcatatgaaggacagaacaagaacccagaaatg
tgcagagtactgctcacacatgaggttatgtgcagccgctgctgcgagaagaagagttgt
ggcaatcgtaatgagacgccctctgatccagtcatcattgacaggtttttcttgaagttt
ttcctgaagtgcaatcagaattgtctgaagacagcagggaacccgagggacatgagaaga
ttccaggtggtcttgtccagcacagtgagcgtagacggacacgtcctggccgtgtctgac
aatatgtttgtccacaacaactctaaacatggccggcgagctcgccgattggagccggga
gagtctgtggagaataccatggaatacgctactccctgcatcaaagccatcagccccagt
gaaggctggaccaccggcggggcgatggtcatagtcattggggagaactttttcgacgga
ctgcaggtggtgtttggaagcatgctcgtgtggagtgagctgatcactccacatgcgatc
cgtgtacagacgcctcctcgacacatccctggggttgtggaggtaactctgtcatataaa
tcgaagcagttctgcaagggagcacctggacgcttcatctacacagcccttaatgagcca
actatagactacggttttcagcgacttcagaagataattccccggcatccaggtgaccca
gagaaactagccaaggagattctcctaaaaagagcagcagatcttgttgaggctctgtat
ggaaatccacacagtaatcaggatatgctgctgaaacgtgcagctgatattgctgaggca
ctctacagcgttcctcgtcctcacagtcagctgcaggcacttcccagctcaccagtccac
gggagtgttatgggcttgggctcctatccatcccagttaggggtcagcattggagatcca
ggacagagcagccaaggttatatccgtaactccagcagtttgtccccaagaggttacccc
tcagcctccactccccaacagtcgagctatgggggcagcgggggaatgactggaggctac
ggtacagttccaatgacaagtctgggtgttcctgggtctcctggattcagcagcgcctca
cccacaagctctccctacataatgccagcaagccccacaataccaggaagctccagctcc
tcgtcatctctcttgcctttctcctctttcccttccgctgctaaacagaagagtgctttt
gctcccgtcctcagaccccaaggttctccttcccccgcctgccctgcctcgggggggaac
agcttcagagcgatgacgggcctggttgtccccccgatgtag
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