Cyprinodon variegatus (sheepshead minnow): 107089266
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Entry
107089266 CDS
T06110
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107089266
Pattern recognition receptors [BR:
cvg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107089266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
PRY
NOD2_WH
LRR_4
SPRY
LRR_1
Motif
Other DBs
NCBI-GeneID:
107089266
NCBI-ProteinID:
XP_015237439
Ensembl:
ENSCVAG00000021578
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MDQIADEVKTDFRGLLPESVPSLQAEIHHFQPSFSAQSGSNVVAPSITGSCIGSVNINIS
MNKGSNDFSRKSSNEDVTGSSGVQQIQNKIAECQQKVKMTLRRKFSHLHEGIGTDANKMS
LNQIYTELYLTEGGCGEVNKEHEVRQIEIVSKKCVTQEKSIHCNSLFERQPGERHIRTVV
TRGVAGIGKTVLVSKFALDWADGKANASIDVVFSLSFRELNLMSKKSFSLVELLCVFFPE
IKDTGILNCSEKKILFILDGLDESRLSLDFHRSEIMSDVAQPTTVSVIMTNLIRGGLLPL
ALVWITSRPVASAQIPLEYIDLFTEVRGFNNSQKDEYFRKKISDQTTANSVIAHVKSCRS
LHIMCHIPVFCWMAASVLEKKLANKDTKDTPKSLTQMYINFLSLYVENMKNKMPGRRNST
TDCVRTNLLALGKLAFKELEKGHLIFYERDLILNGIKVSQASMFSGIYTQIFSQEITLCE
EKMFCFLHLSIQEFFAALYVYLTFHNENNNVLVKKSSASRRFLSRESSELILYKEAVEKA
LQCENGHFDIFLRFLLGLSMESNQTLLEHLMTSNRTHQRTRTEVIKHIKERIRASSSPDR
CLNLFHCLNELNDDTLVGEIQDIFNSGVLNQSTLSPAQWATLIFVLLTSEEEISVFDLSN
YMRSEEGLLRLMPVVKTAQVANLKACNLTPMCCENLANGISSSQLRELDLSNNCLTDSGL
KQLSDGLKNSKLQTLRLRSCGLTEDSAITLAFVISSTCCQLKELDLTDNDFQDPGVRKFS
TGLGSSFCKLEQLRLSGCRVTEEGCTFLASALNSSHLKELDLSYNHPGNSGLMLLSTLLE
DPQCTLQKLCVEQCGESRIQPGPKKYLKTLMLDPDTAHRDISLSNGNQKATRWIKQSYPD
HPDRFDFRAQVLCKEGLTGRCYWEVEWVGRVCIAVAYRRISRKGESPDCWLGHNHVSWGL
NCHKDGYRILHGDMNDVVPVTVNSNKVGVYLDWTAGALSFFRVSCGDLTLLHTFYTTFTE
PVYPGFHLGWVDSTVLLR
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaattgctgatgaagtaaaaacagacttcagaggactcctcccagagtcggtt
ccatcattacaggctgaaatccatcatttccagccaagcttcagtgctcagagcggcagc
aatgtggtcgctccctccatcactggctcttgcattggcagtgtcaacattaatatatcc
atgaacaaaggaagcaatgacttctccagaaaatcttcaaatgaagacgttacaggtagc
tctggtgttcagcagatccaaaataaaattgcagagtgtcaacagaaagtgaaaatgacc
ttgaggaggaagttcagtcatttgcatgagggaattgggacagatgcaaataagatgtct
ctcaatcaaatctacacagagctttatctcacagagggaggatgtggggaagttaataaa
gaacacgaagtgagacagattgagattgtatcaaaaaaatgtgtaacccaggagaaatcc
atccactgcaactccttgtttgaacgtcaaccaggagaacgccacataagaactgttgtc
acaaggggagtcgctggtattggaaaaactgtattggtcagtaagtttgctctcgactgg
gctgatgggaaggcaaacgcaagcatagatgttgtgttttctctgtctttccgggagcta
aatctaatgagtaaaaaaagcttcagtcttgtggaactcctctgcgtctttttcccagaa
ataaaagacacaggaatccttaactgttctgaaaagaaaatccttttcattctggatggt
ctggatgagagtcgcctctctctggactttcacagaagtgaaataatgtcagatgttgca
cagccaacaacagtatctgtaatcatgacaaacctgatcaggggaggtctgcttcccttg
gctctagtctggattacatcccgacccgttgcttctgctcaaatcccacttgagtatatc
gatctgtttactgaggtcaggggatttaacaactcacagaaagacgagtacttcaggaag
aagatttcagaccaaaccacagcaaacagcgtgatcgcacatgtgaaatcctgtagaagc
ctccacatcatgtgtcacataccagtcttctgttggatggcagcgagtgttcttgagaag
aaactggcaaataaagacaccaaagacacgcctaagagtctgacacagatgtacatcaat
ttcctttccctctatgtggagaatatgaagaacaaaatgcctggaagaagaaactctacc
actgactgtgtgagaactaatctcctggcattgggtaaactcgctttcaaagagcttgaa
aagggccacctgatcttctatgagcgcgacctcatccttaatggcatcaaagtgtctcag
gcatccatgttttcaggaatctacacgcagatcttcagccaggagattacactgtgtgaa
gagaagatgttttgctttttgcacttgagcattcaagaattctttgcagcgctgtacgtc
tacctcactttccacaatgagaataacaatgttttggtcaaaaagtcatctgcgtcacgt
cgatttctgtccagagagtcatcagagctcatcctctacaaagaagctgtagaaaaggca
ttgcagtgtgaaaatgggcattttgacatatttctgcgcttccttttgggtttatcaatg
gagtccaatcagacgctgttggagcacctaatgacgagcaatagaacacatcaaagaaca
agaactgaagtcattaaacacataaaggaaaggataagggcgagctcatctcctgacaga
tgcctcaacctgtttcactgtctgaatgagctgaatgatgacactcttgttggagaaatt
caggacatcttcaactcaggcgttttgaaccaaagtactctttcacctgctcagtgggcc
actctgatctttgtattgctgacctcagaagaggagattagtgtttttgatctgagcaac
tacatgaggtcagaggaggggctcctgagactaatgcctgttgtgaaaacagctcaagtg
gcaaatttaaaggcatgtaacctcactccaatgtgctgtgaaaatctggccaatggcatc
agctcatcccaactcagagagctggacctgagtaacaattgtctcacagattcaggccta
aagcaactctctgatggactgaaaaacagcaaactgcagacactaagactaagaagctgc
ggcctaacagaggacagcgctattactttagcatttgttatcagctccacctgttgtcag
ctcaaagaactggatcttaccgacaatgactttcaggacccaggagttcgaaagttctcc
actggactaggaagttctttctgcaaactggagcaacttcgtctctcaggatgcagagta
acagaagaaggttgcacattcctggcatctgcactgaattcatcccacctgaaagagctc
gacctgagctacaaccatccaggaaattctggcctgatgctgctttcaactctgctggaa
gaccctcagtgcacactgcagaaactttgtgtggagcaatgtggggaatccaggatccaa
cctggtcccaagaaatacctgaagacactgatgctggacccagacacggcacacagggat
atttctctttccaatggaaaccaaaaagcaacacgttggatcaagcagtcgtatcccgat
cacccagacaggtttgatttcagggctcaggtgttgtgcaaggagggactgactgggcgc
tgctactgggaggtagagtgggtcgggagggtctgcatcgctgtggcctacagacggata
tccaggaaaggggagagtccagactgctggttaggccacaaccacgtctcctggggcttg
aactgccataaagacggctacaggattctgcatggggacatgaatgatgtggtgcctgtg
acagtcaactccaataaagtaggagtttacctggattggacggcaggggcactttcattt
tttagggtctcctgtggtgacctaactctcctccataccttctacaccaccttcactgaa
cccgtctatccggggttccaccttggctgggtggactctactgtccttttacgctaa
DBGET
integrated database retrieval system
