Cyprinodon variegatus (sheepshead minnow): 107096445
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Entry
107096445 CDS
T06110
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107096445 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107096445 (usp42)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107096445 (usp42)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107096445 (usp42)
Ubiquitin system [BR:
cvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107096445 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107096445
NCBI-ProteinID:
XP_015248582
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MTIVDRLSEKSDHESVGFNRSFTSGEVGMDGSCSSSWAVGPSMAGDSPRLKSPGGCLGPT
PGAAVYNGTHPTVDCPKDQVMSSEDGIDSPQKVLFPPERLSLKWTQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPLTNFMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKSVSDTFDPFLDVTLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPEYLDLRPFMSQSQGEPQIYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYHMNDSSVSMSDVRSVLNQQAYVLFYIKSCDAKKSGD
YSNLSHNPGIPGQSSPRPVVTQRIHTAIPHSNTGFIGPQLPPHMTKTPLHVNGNGSLRDY
PSNSKASSSAVGKPNHGGASSSASHSISRPTSIPDQEKRQKLSFFIGQGKQNRPSSSSSY
SHPSSASGSSSSSLSASQSTSDVRFVPRQLNHVNGTSCSNGDQPAGGSGSSFLVPYSQES
SEESDQESCSTQDLGCTSKLQAKGSNATGEVFASSSKNINGEINLHHNSSELNGSASELT
KKNQNGQFNGHHRVNGQTPDKVSTHNHTSSSVNAVANGLGSDHKEANRDSASSQAASENI
HPAAKESQPLPAADERVKVLPEPLPHQTPSSAVSASPSATLSKTQSVASRDSTNSGCPVN
FSNVSSEPARCERGNGVSAAAENFSKNEEVKDSPQNNGPSARTETNMEDKGQCQSKSGSR
GIERQTSHDRERLYSEHSRDREKHYRDRSPPRESHSDRLRYRRDYRDHHRSYRDRYPPPE
RSYRDWDYDRRKDRAGWPSWEPDRDRRSYHYSHYHHRFDLSHERRGHPRLQEPHGRCRWQ
QDGRESWPMKDKRNGWDRDSYYSKERSASPGGTGLESNKSKVSPHRNHLSNASSTHKRDD
QSDKKTAAYLRKDREDSSEGHRSKKHKKSKKKKKSKDKDRHHESSSDLDSDKAAETRKRK
KKKRRHRDSDSDSGRGHTNRSSKDRENRKRHHSDMKDSRYEKDFLPEKRHRSDLAVGGRD
HPSPSHHNPSSNHSVHQHLNGYTGNGRTNGDFNGFSSGLK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagattgtcagaaaaatctgaccacgagtcagttggatttaaccga
tccttcaccagtggagaagtggggatggacggcagttgttccagtagttgggcggtgggt
cccagcatggccggtgactctccgaggctcaagtctcctggaggctgcctgggtccgacg
ccaggggctgccgtctataacggcactcaccccactgtggactgtcccaaggaccaagtg
atgagcagtgaggatggcatcgactcaccccagaaggtcctgtttcctccggagcggctc
agcttaaagtggacacaggttcaccgcatcggtgctggcctgcagaacatggggaacaca
tgcttcctcaactcagccctgcaatgcctcacttacactccgccgttaaccaacttcatg
ctgtcaagggagcactccaaaacctgtcatgagcctgggttctgtatgatgtgcacaatg
caaaaccatatcattcaggtttttgccaactctgggaatgtcattaagcccatcggtgtc
ctcaatgagcttaaacgaatagcaaagcacttccgctacggaagccaggaggatgcacat
gagttcctgcggtacacggtggacgctatgcaaaagtcctgcttacctggaactaaattg
gaccggcaaacgcaggccaccactttcatccatcaagtatttggagggtacctcaggtcc
agagtaaaatgtctgaactgcaaatcagtttctgatacatttgatccttttctggatgtc
actctggagattaagacggcaccgagtgtctccaaagctctggagcagtttgtcaaacca
gaacagctagatggtgaaaatgcctacaagtgcacaaagtgcaaaaaaatggttacagcc
tcgaagagattcacaatccaccgcagccccaatgtgctcaccctttcactaaaacgattc
gcaaacttcactggaggaaaaatcacaaaggatgttaaatatccagaatacctggacctg
cggcccttcatgtctcagtcccaaggagagccccagatctacggcctgtacgctgtgctg
gtccactctggcttcagctgccatgctggacattacttctgctacattaaggctagcaat
ggtcagtggtaccacatgaacgactcctctgtgtctatgagtgacgtccgctctgtcctc
aaccaacaggcctatgtgcttttctacattaaatcatgtgatgcgaagaagtctggggac
tacagcaatctgagccataacccaggtatccctggtcagtcgtctccccggccggtggta
acccagcgcatccacaccgccatcccccacagcaacacaggcttcataggtccccagctc
ccaccacacatgaccaagactcctctccatgttaatgggaatggatctctgagggactat
cccagcaactctaaggccagcagcagtgcagttggaaaacctaaccacggaggggcttct
tcctcagcctcccactcaatcagccgacccacgtcgattccagaccaagagaagcgtcag
aaactgtcgttctttatcggacaaggcaaacagaaccgaccatcttcctcctcctcctac
agccacccatcctcagcaagcggctcctcctccagctctttatctgcctctcagtctacc
tcagacgttcgctttgttccacgtcagctaaaccatgttaacggcacgtcttgcagtaac
ggggatcaacctgccggtggcagtgggtcctctttcttggtgccgtacagtcaggagtct
tcggaagagtcggaccaggagagctgtagcactcaggatttgggctgcacgtccaagctt
caggctaagggcagtaatgccacaggagaagtcttcgcctcctcttctaaaaacattaac
ggtgaaataaatctgcatcataacagtagtgaattgaatggatcagcctctgaattaact
aaaaaaaaccaaaatggacaatttaatggacaccacagagtaaatggacaaacccctgat
aaggtatccacccataatcacaccagttcttctgtgaatgctgttgccaatggacttggc
agtgaccataaggaagcaaacagagactccgcctcatcccaggccgcttcagagaacatt
catcctgccgctaaagaaagccaacctctccctgctgctgatgaaagggttaaagtgctg
cccgaaccccttcctcaccaaacaccatcctctgctgtcagcgcttcaccttcagccact
ttatccaagacccagtctgttgcatctagagactctactaattctgggtgtcccgtgaac
ttctcaaacgtatcctcagaaccagcccgctgtgaaaggggtaacggggtttcagcagct
gctgagaattttagcaagaatgaggaagttaaggattccccacagaacaatggtccatca
gccaggactgaaactaacatggaggacaagggacagtgccagtccaagtcaggttctaga
ggcattgaaagacagacctcccatgacagggagagactttactctgagcacagcagagac
agagagaaacactacagggacagaagtccgccacgggaaagtcacagcgaccgccttcgc
tacagacgagattaccgagatcaccatcgctcatatagggaccgttatcctcctcctgaa
cgcagctacagggactgggactacgaccggcgcaaggaccgagctggctggccgtcctgg
gagcctgatcgtgaccgacgctcttaccattacagccattaccatcacaggtttgatttg
agccacgagaggagaggacacccccgtcttcaagagcctcacggtcgctgcaggtggcaa
caggacggtcgggagtcctggccaatgaaggacaaaaggaatgggtgggacagggacagt
tactattcaaaggaaaggagtgcctctcctggtggtaccggcctagaatcaaacaagtcc
aaggtctccccccatcggaatcatctctctaatgcttcttcaactcataagagggatgat
caaagtgataagaagacagctgcttatctgagaaaggacagagaggacagctcagaggga
catcgctcgaaaaagcataaaaagagcaagaagaagaagaagtcgaaggataaagaccgg
caccacgaaagcagctctgatctggattcagacaaagcagctgaaaccaggaagaggaag
aagaagaagagacggcacagggacagtgattcagattcagggcgaggccacaccaacagg
agcagcaaagacagggagaatcgaaaacggcatcactctgacatgaaggactcgaggtac
gaaaaagactttttaccggaaaaacgtcaccgcagcgacttagcagtgggaggcagggac
cacccatcaccatctcaccataatccctcctcaaaccattcagtgcaccaacatcttaac
ggatacacaggaaatggtcgaaccaatggtgacttcaatggattttcaagtggcctcaag
tag
DBGET
integrated database retrieval system
