Cyprinodon variegatus (sheepshead minnow): 107101470
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Entry
107101470 CDS
T06110
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
cvg04520
Adherens junction
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107101470
09144 Cellular community - eukaryotes
04520 Adherens junction
107101470
04530 Tight junction
107101470
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107101470
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107101470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
107101470
NCBI-ProteinID:
XP_015255891
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
LVAVYEEQDPHNGGDGTSASSTGTQSPDPFAGEMNAASAFQPYQAASEIEVTTSALRSSM
SLNVRRSSDPSVADIPPGEVMIGQEEPSRRNPARWSTTPGFQKYSVMPNTQGATGTIEQG
RGAQVYRSLPRDATTWAAQFQRNMIRSSLSANHPMVDQWLDQQEQEEEEADRRTYERRIE
RIEPVGRADSSLERSPVLSLESMLKPVEVSNEGGPLGIHVVPFSSQDVRTQGLLVKRLEP
GGKAEKERLFQENDCIVRINQGDIRKLRFEQAQNIFRQAMRCQRILFHVVPASMKRHYDV
LAAQNELSPPQSHRVRFSQDPQQPGDRTSMGAGMPPTSGQQSINHNHQGPLSGSTPEPSR
RYATLPHALPHPLISRTPSAPSPSLQRRISTTPSNIFYQKKKGRSFNIQLKKGAEGLGFS
ITSRDVPIGGSAPIYIKNILPRGAAIQDGRLKAGDRLLEVSGVDLNGKSQEEVVALLRAT
PMDAMVNLLVLRQDDPILPREVWNSPSLFQFSQKQEDDIVLTPDGTREFLTFEIPLNDSG
SAGLGVSVKGNRSKESQADLGIFVKSIINGGAASKDGRLLVNDQLIAVNGESLIGMTNQD
AMEALRKSMSVEGNKRGMIQLIVARRLIKDSEEAYASPGMLEFPIKSPSENNDDPNSQFV
YESIDSLDNTPTTRANVPARNGHFQLSPTVNMPQDDTVMIEDDRPPPLPAHLSDHSSSSS
HDDMGFVGENPVVWVREMPGQNECSLSPDAEPDAAFQREGFARQSMSEKRSKQYDSPAHL
DIIKNRKSKSMDLGSEERQFGASPDLKKSSSMESLHNPAAEVIMNEELNVQRMPSRIIRG
RGCNESFRAAIDKSYVQRGFIAKEENSVETLDEDTEESFPSGQESMSTSGDLSLGGGLAD
DKQKDGATGGPKEIKKGEKEKDKDKNKAKKGVLKGLGEIL
NT seq
2822 nt
NT seq
+upstream
nt +downstream
nt
ctggttgcagtgtacgaagagcaggacccacacaatggaggtgatggaaccagcgccagc
tccacaggaacccagagtccagacccttttgccggtgagatgaatgcagcatcagcattc
caaccttaccaagctgccagtgagatcgaagtcacaacatctgctctacgatcaagcatg
tcgttgaatgtccgtcgaagcagcgacccctccgtggctgacatccctccaggagaggtc
atgattggtcaagaggaaccatcgaggaggaatccggctcgctggtccacaacacctggt
ttccagaagtacagcgttatgccaaacacacagggtgccacgggcaccatagaacaggga
agaggagcccaagtctatcggagtcttcctcgtgatgcgactacctgggctgctcagttt
cagagaaacatgattcgttcttcccttagtgccaatcatccaatggtcgaccaatggctt
gaccaacaggaacaggaggaggaggaagcagaccgaagaacatacgaaaggagaattgag
cgaatcgagcctgtagggagggccgactcttcgctggagcgttcacctgtgttaagtctt
gaaagcatgctcaagccggtcgaagtgtccaatgaaggagggcccctggggatccacgta
gttcctttcagttcacaggatgttaggactcagggcttgctggtgaagcgtttggagcct
ggaggaaaagctgagaaagagcgtctcttccaggaaaacgactgcatagtcaggattaat
cagggagacattcgcaaactgcgctttgaacaagctcagaacattttcaggcaggcgatg
cgttgccagcgcattcttttccatgtggtgcctgcgtccatgaagaggcactatgatgta
cttgcggctcagaacgagcttagtccaccccagtcgcacagggtccgctttagccaagac
ccccagcaaccaggggaccggacaagtatgggtgcagggatgccacccacatctggacag
caaagcatcaatcacaatcatcaaggtcccctgtcaggaagcaccccagaaccaagtcgg
cggtatgccactttaccgcatgccttacctcaccccttaatctccaggaccccatcagcg
ccttctccctccttgcagcgtagaataagcacaaccccatccaacatcttctaccaaaag
aaaaagggacgcagcttcaacatccagctgaagaaaggcgcagagggtcttggattcagc
atcacgtccagagatgtccctattggtggaagtgctcctatttacattaaaaacattctt
cctcgaggggctgccatccaagatggacgactgaaagctggagaccggctgttggaggtt
agtggagtggacctgaatggaaagagtcaggaggaagtggtggccctacttagagctacc
cccatggatgcgatggtgaacttgctggtgcttcgtcaggatgaccccatactgcctcga
gaagtgtggaactcaccatcactttttcaatttagccaaaaacaggaggatgacatagtg
ctaactccagatgggacgcgggagtttttgacctttgagatcccgctcaatgactcaggc
tcagcaggcttgggagtcagcgttaaggggaaccggtccaaggagagccaagctgatctt
ggaatcttcgtgaaatctattattaatggaggagctgctagtaaggatggccgtcttctt
gtcaatgaccaactcattgctgtcaatggagagtcgctgattgggatgaccaaccaggat
gccatggaagcacttcgaaagtccatgtcggtagagggcaacaagcgaggaatgattcag
ctcattgtggcgcgacgactgattaaggacagtgaggaagcctatgctagcccggggatg
ctggagtttcccattaagtctccttcagaaaacaatgacgatccaaactcccagtttgtt
tatgaatctattgacagcttggacaacacgcctacaacccgggctaatgtacctgcacgc
aacggtcacttccagctctctccaactgtcaacatgccacaagatgacacagtgatgatt
gaggacgataggccaccaccgcttccggcccacctgtctgaccattcgtcctccagttcc
cacgacgacatgggctttgtaggagaaaacccagttgtctgggttcgcgagatgcccggt
caaaacgaatgctctctaagtcccgatgcagaacctgatgctgcattccagagagaaggc
ttcgcccggcagagtatgtcagaaaagcgctccaagcagtatgacagcccagctcatctg
gacatcatcaagaaccgcaagtccaaaagcatggatcttggttctgaagagcgacaattt
ggagcttcccctgatttaaaaaagtccagctccatggagagtctccacaaccctgctgct
gaggttataatgaacgaagagctcaacgtccaaaggatgccctcgcggatcatcaggggt
cgaggctgcaacgagagcttccgggcggctatagacaaatcctatgtgcagcgtggtttc
atagcaaaggaagagaacagcgttgagacattggatgaagacacagaggaaagctttcct
tcaggtcaggagtccatgtccaccagcggcgatctcagcctcggtggcgggctggctgat
gacaagcagaaagatggcgccacgggcgggccaaaggaaatcaagaaaggggagaaggag
aaagacaaggacaagaacaaagcaaagaagggtgttctgaaaggcctgggtgagattctc
ag
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