Corynebacterium vitaeruminis: B843_02100
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Entry
B843_02100 CDS
T03042
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cvt
Corynebacterium vitaeruminis
Pathway
cvt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B843_02100 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvt03021
]
B843_02100 (rpoB)
03400 DNA repair and recombination proteins [BR:
cvt03400
]
B843_02100 (rpoB)
Enzymes [BR:
cvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B843_02100 (rpoB)
Transcription machinery [BR:
cvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B843_02100 (rpoB)
DNA repair and recombination proteins [BR:
cvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B843_02100 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHI21812
UniProt:
W5XXX3
LinkDB
All DBs
Position
428964..432458
Genome browser
AA seq
1164 aa
AA seq
DB search
MLEGPILAVSRQTKADIPGAPKRKSFAKITEPIEVPGLLDIQLDSFAWLVGTPEWRARKQ
EELGEGARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEDMKNTIEEAKDKDINYSAPL
YVTAEFINNDTQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTIDK
STERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQITERFG
FSELMMSTLEADGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLAKVGR
YKVNRKLGLGGDNDGLMTLTEEDIATTLEYLVRLHAGETSMTSPSGTVIPVETDDIDHFG
NRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTS
QMSQFMDQNNSLSGLTNKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNI
GLIGALASYARVNPFGFIETPYRKVENGKLTDQIDYLTADEEDRFRVAQAKTAVDAEGNI
IDDRVTVRMKNGDIAVVSGDEIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQ
AVPLVRSEAPLVGTGMELRAAYDAGDLIINKAAGVVENVCADYITVMQDDGLRETYLLRK
FERTNQGTCYNQKPLVNIGDRVEDGQVLADGPGTKDGEMSLGRNLLVAFMPWEGHNYEDA
IILNQRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLKDLDERGIVRIGA
DVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFS
REDDDDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPAEDMPFLPDGTPVD
IILNTHGVPRRMNIGQVLEVHLGWLAAAGWHVDPADPKNAELLKVLPEDLYDVPAGTLTA
TPVFDGASNEELAGLLANSNPNRDGDVMVDENGKATLFDGRSGEPFPYPVSVGYMYMLKL
HHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKS
DDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDD
EFDQAGASLGINLSRDERSDADIA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccaaggccgacatccctggggct
ccaaaacgtaagtcgtttgcaaagattacggaaccaatcgaggtcccgggacttcttgat
attcagctcgactcctttgcttggctcgtcggcacgccggagtggcgtgcgcgcaagcag
gaggagctgggtgagggcgcccgcgtcacaagcggactcgaggacatcctcgaggagctc
tcgccgatccaggattactctggaaacatgtctctgtctctgtcagagccgcgcttcgag
gacatgaagaacaccatcgaagaggccaaggacaaggacatcaactactccgcgccactg
tacgtgaccgcagagttcatcaacaatgacacccaggagatcaagtctcagaccgtcttc
atcggcgacttcccgatgatgaccgacaagggcacgttcatcgtcaacggcaccgagcgt
gtcgtcgtctcccagctggttcgttccccgggcgtctacttcgatcagacgatcgacaag
tccaccgagcgcccgctgcactccgtgaaggtgatcccctcccgcggcgcgtggctcgag
ttcgacgtggacaagcgcgacaccgtgggcgtgcgcatcgaccgcaagcgccgccagccg
gtcaccgtcctgctgaaggccctcggctggaccaccgagcagatcacggagcgcttcggc
ttctccgagctcatgatgtccaccctcgaggcggacggcgtggccaacaccgacgaggcc
ctgctggagatctaccgcaagcagcgcccgggcgagcagccgacccgcgacctcgcgcag
tccctgctggacaactccttcttccgcgccaagcgctacgacctggccaaggtcggccgc
tacaaggtcaaccgcaagctgggcctgggcggcgacaacgacggcctcatgaccctgacc
gaagaggacatcgccaccacgctcgagtacctcgtgcgcctgcacgcgggcgagacctcg
atgacctcgccgtccggcaccgtcatcccggtcgagaccgacgacatcgaccacttcggc
aaccgccgcctgcgcaccgtcggcgagctcatccagaaccaggtccgcgtgggcctgtcc
cgcatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgccgagtcgatcacgccg
acctcgctgatcaacgttcgcccggtctccgccgccatccgtgagttcttcggaacctcc
cagatgtcgcagttcatggaccagaacaactccctgtccggtctgacgaacaagcgccgc
ctctcggccctgggccccggcggcctgtcccgcgagcgcgccggcatcgaggtccgcgac
gttcacgcctctcactacggccgcatgtgcccgattgagactcctgagggcccgaacatc
ggtctgatcggcgccctggcctcttacgcccgcgtgaaccccttcggcttcatcgagacc
ccctaccgcaaggtcgaaaacggcaagctgacggaccagattgactacctgaccgccgac
gaggaggaccgcttccgcgtcgcccaggccaagaccgccgtcgacgccgagggcaacatc
atcgacgatcgcgtcaccgtccgcatgaagaatggcgacatcgccgtcgtctccggcgac
gagatcgactacatggacgtctcgccgcgccagatggtctccgtggctaccgcaatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggtgcgaacatgcagcgccag
gccgtgccgctggtgcgttccgaggctccgctggtcggtaccggcatggagctgcgcgcc
gcctacgacgcgggcgacctcatcatcaacaaggccgccggcgtcgtcgagaacgtctgc
gccgactacatcaccgtcatgcaggacgacggcctgcgcgagacctacctgctgcgtaag
ttcgagcgcaccaaccagggcacctgctacaaccagaagccgctggtcaacatcggcgac
cgcgtcgaagacggccaggtgctggccgatggcccgggcaccaaggacggcgagatgtcg
ctcggccgcaacctgctggtcgcgttcatgccgtgggagggccacaactacgaggacgcc
atcatcctcaaccagcgcgtggtggaggaggacatcctcacctcgatccacatcgaggag
cacgagatcgacgcccgcgacaccaagctcggtgccgaggagatcacccgtgagatcccg
aacgtgtccgaggacgtgctcaaggacctcgacgagcgcggcatcgtccgcatcggcgcc
gacgtccgcgacggcgacatcctggtcggtaaggtcaccccgaagggcgagaccgagctg
accccggaggagcgcctgctgcgcgccatcttcggcgagaaggcccgcgaggtccgcgac
acctccatgaaggtgccgcacggtgagaccggcaaggtcatcggcgtccgccgcttctcc
cgcgaggacgacgacgatctggccccgggcgtgaacgagatgatccgcgtctacgtcgct
cagaagcgcaagatccaggacggcgacaagctcgccggccgccacggcaacaagggcgtc
gtgggcaagatcctgccggccgaggacatgccgttcctgccggacggcaccccggttgac
atcatcctcaacacccacggtgtgccgcgtcgtatgaacatcggccaggtgctcgaggtt
cacctgggctggctggctgccgccggttggcacgtggacccggccgacccgaagaacgca
gagctgcttaaggtgctgccggaggacctctacgacgtcccggctggcacgctcaccgcg
accccggtgttcgacggcgcctccaacgaggagctggctggcctgctcgccaactcgaac
ccgaaccgcgacggcgacgtcatggtcgacgagaacggcaaggccaccctgttcgacggc
cgctccggcgagcccttcccgtacccggtgtccgttggctacatgtacatgctgaagctg
caccacctggtcgacgagaagatccacgcccgctccaccggcccgtactccatgattacc
cagcagccgctgggtggtaaggcccagttcggtggccagcgcttcggcgagatggaggtg
tgggcaatgcaggcatacggcgctgcctacaccctgcaggagcttctgactatcaagtct
gacgacgtggtcggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaacatcccg
gatccgggcatcccggagtccttcaaggttctcctcaaggagctgcagtccctgtgcctg
aacgtggaggtcctctccgcggacggcaccccgatggaactgtccggctccgacgacgat
gagttcgaccaggccggtgcctctctcggcatcaacctgtcgcgcgacgagcgttccgac
gccgacatcgcctaa
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