Cellulomonas wangleii: KG103_04290
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Entry
KG103_04290 CDS
T08575
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
cwan
Cellulomonas wangleii
Pathway
cwan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cwan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KG103_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwan03400
]
KG103_04290
Enzymes [BR:
cwan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KG103_04290
DNA repair and recombination proteins [BR:
cwan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KG103_04290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QVI63137
LinkDB
All DBs
Position
888151..889722
Genome browser
AA seq
523 aa
AA seq
DB search
MRDFTRTAEPAGAPPAGVEGTGRRFVVQRHRARRLHYDVRFEIDGVLVSWAVPKGPTLDP
AARRMAVHVEDHPLEYEDFEGVIPHGQYGGGDVIVWDRGTWEPYKSDDPAAEVAGGLLHA
ELYGERLRGKFLLVRRDGGARDGKEQWLMLHKKDEHAVDGWDAEDHPTSVVSGRTNDEVA
AAPDRLWRSGVPASEAEVETHPAAPQVDGPSDDELAALDDLGASGTWEVFGRRLRVTNLD
KELFPGRDDEPPVTKRELLRYAARIAPVALPYLAGRALNMHRFPQGAATAGFWHKQLPDH
APDWVPRWDRPDVDPGESTTYLVVDEAAALVWPANFGALEWHAWTSRTSAPDLPTYALVD
LDPGPSTAWDDLVLLARLHRDAFEHVGVRAFPKLTGRRGIQVWVPVTVGPSFDETRAWVE
RLSRTVGKVVPDLVSWRWEVRERGGQARLDYTQNAVNKTLVAPYSPRAAAGAPVSAPITW
DELDAEWLRPDAFTVRTVLERVAERGDPFRGALAGDQVLPPLR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacttcacgcgcacggccgagcccgcgggcgcgcccccggcgggagtggagggc
accgggcgccgcttcgtcgtgcaacggcaccgcgcgcgccggctgcactacgacgtgcgg
ttcgagatcgacggcgtcctcgtcagctgggccgtgcccaaggggccgacgctcgacccg
gcggcgcgtcgcatggccgtgcacgtcgaggaccatcccctggagtacgaggacttcgag
ggcgtgatcccgcacgggcagtacggcggcggcgacgtcatcgtgtgggaccgcggcacg
tgggagccgtacaagagcgacgacccggccgcggaggtggccgggggtctgctgcacgcc
gagctgtacggcgagcggctgcgcggcaagttcctgctggtccggcgcgacggcggcgcc
cgcgacggcaaggagcagtggctcatgctccacaagaaggacgagcacgccgtcgacggc
tgggacgcggaggaccacccgacgtccgtggtgtcgggacgcaccaacgacgaggtcgcc
gccgccccggaccggctgtggcgctcgggcgtcccggcgtccgaggcggaggtcgagacg
catcccgcggcgccgcaggtcgacgggccgtccgacgacgagctcgccgcgctggacgac
ctcggcgcgtcgggcacgtgggaggtcttcgggcggcggctgcgcgtcacgaacctcgac
aaggagctgttccccggccgggacgacgagccgccggtgaccaagcgcgagctgctgcgc
tacgcggcgcggatcgcgcccgtcgccctgccgtacctggcgggccgcgcgctcaacatg
caccgcttcccgcagggcgccgccaccgccgggttctggcacaagcagctgccggaccac
gcaccggactgggtgccgcgctgggaccggcccgacgtcgacccgggggagtccaccacc
tacctcgtggtggacgaggccgcggcgctcgtgtggcccgccaacttcggggcgctggag
tggcacgcgtggacgtcgcgcacgtcggcccccgacctgccgacgtacgcgctggtggac
ctggatcccggcccgtcgaccgcctgggacgacctggtgctgctcgcccggctgcaccgc
gacgcgttcgagcacgtcggcgtgcgggcgttccccaagctcaccgggcgccgcggcatc
caggtgtgggtgccggtcaccgtcggcccgtcgttcgacgagacgcgtgcctgggtcgag
cggctctcgcgcaccgtcggcaaggtcgtgcccgacctggtgagctggcgctgggaggtg
cgtgagcgcggtgggcaggcgcggctcgactacacccagaacgcggtgaacaagacgctc
gtcgcgccgtacagcccgcgggctgcggcgggtgcgccggtgtccgcgccgatcacgtgg
gacgagctcgacgccgagtggctgcgccccgacgcgttcaccgtccgcaccgtcctggag
cgcgtcgcggagcgcggtgacccgttccggggtgcgctcgcgggtgaccaggtgctgccc
ccgctgcgctga
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