KEGG   Citrobacter werkmanii: CO701_20345
Entry
CO701_20345       CDS       T05129                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cwe  Citrobacter werkmanii
Pathway
cwe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cwe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CO701_20345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cwe03400]
    CO701_20345
DNA repair and recombination proteins [BR:cwe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CO701_20345
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CO701_20345
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: ATF51295
LinkDB
Position
4104919..4107741
AA seq 940 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSQRLAESFETALDLSGGTAVVADMDNP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDIEAPWASLNPTVHKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELSKFISNRPCASCEGTRLRREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLNDIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQT
QLNGATLAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPLL
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccgcgcgacaagctgattgtcgtcaccgggctttcgggctcaggcaaatcctcgctg
gctttcgacactttgtatgccgaagggcagcgtcgttacgttgaatcgctttccgcgtat
gcgcgtcagttcctgtcgctgatggaaaaaccggatgtcgaccacattgaggggctgtcg
ccagccatctcaattgaacaaaaatcgacatcccataacccgcgatccacggtaggcacc
attaccgaaattcacgactacctgcgcctgctgtttgcccgcgtcggtgagccgcgctgt
ccggatcacgacgtaccgctggcagcgcagaccgttagccagatggtggacaacgtgctg
tcacaaccggaaggcaagcgcctgatgctgctggcacctatcatcaaagagcgcaaaggc
gaacacacgaaaacgctggagaatctggcaagccagggttacatccgcgcccgtattgac
ggtgaagtgtgtgacctgtccgatccaccaaagctggagctgcaaaagaaacataccatt
gaagtggtcatcgaccgctttaaagtccgtgacgacctgtcacagcgtctggcggagtct
tttgaaaccgcgctggatctctccggtggcacggcggtggttgccgatatggacaacccg
aaagcggaggagctgctcttctccgccaactttgcctgccctatttgcggctacagcatg
cgcgagctggaacctcgcttgttctcgttcaataacccggcgggcgcatgtcctacctgc
gacggtctcggcgtgcagcagtatttcgaccctgaccgcgtgatccaaaacccagagcta
tcgctggctggcggcgctatccgtggctgggatcgtcgtaacttctattacttccagatg
cttaagtcactggcagagcattataagttcgacatagaagccccatgggccagcctgaac
ccaacggttcacaaagtggtgctgtacggttccggcaaagagaatatcgaattcaaatat
atgaacgaccgcggtgatacttccgtacgtcgtcacccgtttgaaggtgtgctgcacaat
atggagcgccgttataaagagacggaatccagcgcggtacgcgaagaattatctaagttc
atcagcaaccgaccgtgcgccagctgtgaaggcacgcgcctgcgtcgtgaagcgcgccac
gtgtttgttgagaacacacctctgcctactatttctgacatgagcatcggtcatgcgatg
gatttcttcaacaatctcaaacttgccggtcaacgggcgaagattgcggagaaaatcctt
aaagagattggcgaccgcctcaagttcctggttaacgtcggtctgaactacctgacgctg
tcgcgttcggccgaaacgctctccggcggcgaagcccagcgtatccgtctggcaagccag
atcggtgcgggtctggtcggcgtaatgtacgtgctggatgaaccgtccatcggtctgcac
cagcgcgataacgaacgcctgctgggtacgcttatccatctgcgcaatctgggtaatacc
gtgattgtggttgagcacgatgaagatgcgattcgcgccgctgaccatgtgatcgatatc
ggtcctggcgcgggcgtccacggtggacaggtggtggcggaggggacgctcaatgacatt
atggcagtgcctgagtcactgaccggccagtatatgagcggcaagcgcaagattgaagtg
ccgaaacaacgcgtgcctgctaacccggaaaaagtgctgaagctcaccggtgcgcgcggc
aacaacctgaaagatgtcaccctgacgctgccggttggcctgtttacctgtattaccggc
gtatccggttccggtaaatcaacgctgataaacgacacgctgttcccgattgctcagacc
cagctcaacggtgccacgctggctgaacctgcaccttatcgcgacattcaggggctggag
catttcgataaagttatcgacatcgaccagagccccattggtcgtacgccacgttccaac
ccggcaacctataccggcgtatttacacccgtccgcgaactgtttgctggcgtgccggaa
tcacgcgcgcgcggctacacgccagggcgctttagctttaacgtgcgcggtggacgttgt
gaagcctgtcagggcgacggcgtaatcaaagttgagatgcacttcctgccggatatctac
gtgccgtgtgaccagtgcaaaggcaagcgctataaccgcgaaacgttggagatcaagtac
aagggcaagactatccacgaagtgctggatatgaccattgaagaggcgcgtgagttcttt
gatgccgtcccggcgctggcgcgtaaactgcaaacgctgatggacgttggcttgacttat
attcgccttgggcagtccgcaacaaccctttctggcggcgaggcccagcgcgtgaagctg
gcgcgtgagttatcaaaacgcggtacaggacaaacgctgtacatcctcgatgagccgact
accggtctgcactttgcggatattcagcagttgctggacgtgctgcaccagctcagggat
cagggcaacaccatcgtggtcattgagcataatctggacgtgattaaaacggccgactgg
attgtcgatctcggtccggaagggggtagcggcggcggagaaatcctggttgccggtacg
ccggaaacggttgcagagtgtgaagcctcacacaccgcccgcttcctcaaaccactgctg
tag

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