Citrobacter werkmanii: CO701_20345
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Entry
CO701_20345 CDS
T05129
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cwe
Citrobacter werkmanii
Pathway
cwe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO701_20345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwe03400
]
CO701_20345
DNA repair and recombination proteins [BR:
cwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO701_20345
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO701_20345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ATF51295
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Position
4104919..4107741
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSQRLAESFETALDLSGGTAVVADMDNP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDIEAPWASLNPTVHKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELSKFISNRPCASCEGTRLRREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLNDIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQT
QLNGATLAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPLL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccgcgcgacaagctgattgtcgtcaccgggctttcgggctcaggcaaatcctcgctg
gctttcgacactttgtatgccgaagggcagcgtcgttacgttgaatcgctttccgcgtat
gcgcgtcagttcctgtcgctgatggaaaaaccggatgtcgaccacattgaggggctgtcg
ccagccatctcaattgaacaaaaatcgacatcccataacccgcgatccacggtaggcacc
attaccgaaattcacgactacctgcgcctgctgtttgcccgcgtcggtgagccgcgctgt
ccggatcacgacgtaccgctggcagcgcagaccgttagccagatggtggacaacgtgctg
tcacaaccggaaggcaagcgcctgatgctgctggcacctatcatcaaagagcgcaaaggc
gaacacacgaaaacgctggagaatctggcaagccagggttacatccgcgcccgtattgac
ggtgaagtgtgtgacctgtccgatccaccaaagctggagctgcaaaagaaacataccatt
gaagtggtcatcgaccgctttaaagtccgtgacgacctgtcacagcgtctggcggagtct
tttgaaaccgcgctggatctctccggtggcacggcggtggttgccgatatggacaacccg
aaagcggaggagctgctcttctccgccaactttgcctgccctatttgcggctacagcatg
cgcgagctggaacctcgcttgttctcgttcaataacccggcgggcgcatgtcctacctgc
gacggtctcggcgtgcagcagtatttcgaccctgaccgcgtgatccaaaacccagagcta
tcgctggctggcggcgctatccgtggctgggatcgtcgtaacttctattacttccagatg
cttaagtcactggcagagcattataagttcgacatagaagccccatgggccagcctgaac
ccaacggttcacaaagtggtgctgtacggttccggcaaagagaatatcgaattcaaatat
atgaacgaccgcggtgatacttccgtacgtcgtcacccgtttgaaggtgtgctgcacaat
atggagcgccgttataaagagacggaatccagcgcggtacgcgaagaattatctaagttc
atcagcaaccgaccgtgcgccagctgtgaaggcacgcgcctgcgtcgtgaagcgcgccac
gtgtttgttgagaacacacctctgcctactatttctgacatgagcatcggtcatgcgatg
gatttcttcaacaatctcaaacttgccggtcaacgggcgaagattgcggagaaaatcctt
aaagagattggcgaccgcctcaagttcctggttaacgtcggtctgaactacctgacgctg
tcgcgttcggccgaaacgctctccggcggcgaagcccagcgtatccgtctggcaagccag
atcggtgcgggtctggtcggcgtaatgtacgtgctggatgaaccgtccatcggtctgcac
cagcgcgataacgaacgcctgctgggtacgcttatccatctgcgcaatctgggtaatacc
gtgattgtggttgagcacgatgaagatgcgattcgcgccgctgaccatgtgatcgatatc
ggtcctggcgcgggcgtccacggtggacaggtggtggcggaggggacgctcaatgacatt
atggcagtgcctgagtcactgaccggccagtatatgagcggcaagcgcaagattgaagtg
ccgaaacaacgcgtgcctgctaacccggaaaaagtgctgaagctcaccggtgcgcgcggc
aacaacctgaaagatgtcaccctgacgctgccggttggcctgtttacctgtattaccggc
gtatccggttccggtaaatcaacgctgataaacgacacgctgttcccgattgctcagacc
cagctcaacggtgccacgctggctgaacctgcaccttatcgcgacattcaggggctggag
catttcgataaagttatcgacatcgaccagagccccattggtcgtacgccacgttccaac
ccggcaacctataccggcgtatttacacccgtccgcgaactgtttgctggcgtgccggaa
tcacgcgcgcgcggctacacgccagggcgctttagctttaacgtgcgcggtggacgttgt
gaagcctgtcagggcgacggcgtaatcaaagttgagatgcacttcctgccggatatctac
gtgccgtgtgaccagtgcaaaggcaagcgctataaccgcgaaacgttggagatcaagtac
aagggcaagactatccacgaagtgctggatatgaccattgaagaggcgcgtgagttcttt
gatgccgtcccggcgctggcgcgtaaactgcaaacgctgatggacgttggcttgacttat
attcgccttgggcagtccgcaacaaccctttctggcggcgaggcccagcgcgtgaagctg
gcgcgtgagttatcaaaacgcggtacaggacaaacgctgtacatcctcgatgagccgact
accggtctgcactttgcggatattcagcagttgctggacgtgctgcaccagctcagggat
cagggcaacaccatcgtggtcattgagcataatctggacgtgattaaaacggccgactgg
attgtcgatctcggtccggaagggggtagcggcggcggagaaatcctggttgccggtacg
ccggaaacggttgcagagtgtgaagcctcacacaccgcccgcttcctcaaaccactgctg
tag
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