Synechococcus sp. JA-2-3B'a(2-13): CYB_0942
Entry
CYB_0942 CDS
T00319
Gene name
cpcE-1
Definition
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit
KO
K02288
phycocyanobilin lyase subunit alpha [EC:
4.4.1.32
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00196
Photosynthesis - antenna proteins
cyb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
CYB_0942 (cpcE-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
cyb00194
]
CYB_0942 (cpcE-1)
Enzymes [BR:
cyb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
CYB_0942 (cpcE-1)
Photosynthesis proteins [BR:
cyb00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
CYB_0942 (cpcE-1)
SSDB
Motif
Pfam:
HEAT_2
HEAT_PBS
Arm
HEAT
HEAT_EZ
La_HTH_kDCL
Other DBs
NCBI-ProteinID:
ABD01921
CyanoBase:
CYB_0942
CYORF:
CYB_0942
UniProt:
Q2JMW1
LinkDB
Position
978721..979473
AA seq
250 aa
MLPQQLTWEQAIARLQGDDLQDRYYAAWYLGTVRDPRGVEPLLLALQDERDRTALGGYPL
RRNAAKALGQIGDARAVPGLIEALTCTDFHVREEAAYALAQLGDKRAVDPLLALLQSREQ
EQPWEALIEALGQLQATEAEAAIRPFLNHPSERVRSAAAWVLYRFTQAEELTQILVALLA
HSNSSLRQAALFDLAESGWVAGAPLLATADVALNLRINALKRLFDVALQLGWVPLAQVTA
VILPQLEKLF
NT seq
753 nt
+upstream
nt +downstream
nt
gtgctgccgcagcagctcacttgggagcaggcgatagcccggctgcagggggatgacttg
caagatcggtactatgctgcctggtacctgggcacagttcgggatccaaggggggtagag
ccgctgcttttggcgttgcaggatgagcgggatcgcactgccttggggggctatcctctg
cgccgcaatgccgctaaggccctggggcaaatcggggatgcgcgggccgtgcccggtttg
atcgaggcgctcacttgtaccgactttcatgtgcgggaagaggctgcctatgccttggct
caattgggggacaagcgagcggtggatcccttgctggcactgttgcagtcccgcgagcag
gagcagccctgggaagcccttatcgaggccttgggtcagcttcaggccaccgaggctgag
gcagcgatccggccctttttgaaccatccctctgagcgggtgcgttcggcagcggcttgg
gtgctctatcgctttacgcaagccgaggagctgacccaaatcctggtggcgctactggcc
cactccaactccagcctacgacaggccgctttgttcgacctggccgaatcgggatgggta
gcgggggcgccgctgctggccacagccgacgtggctctcaacctgcgcatcaatgctctg
aagcggctgttcgatgtggcgcttcagttggggtgggtgccgctggctcaggtgacggcg
gtgatcctgccgcaactggagaagctcttctag
DBGET
integrated database retrieval system
