Synechococcus sp. JA-2-3B'a(2-13): CYB_0943
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Entry
CYB_0943 CDS
T00319
Symbol
cpcF
Name
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00196
Photosynthesis - antenna proteins
cyb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
CYB_0943 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
cyb00194
]
CYB_0943 (cpcF)
Enzymes [BR:
cyb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
CYB_0943 (cpcF)
Photosynthesis proteins [BR:
cyb00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
CYB_0943 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Cnd1
Adaptin_N
PDS5
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
ABD01922
CyanoBase:
CYB_0943
UniProt:
Q2JMW0
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All DBs
Position
979490..980179
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AA seq
229 aa
AA seq
DB search
MPLISGFKCTFDYSLPMSSASAAQAFPIAVAQLAAELEQATSPEELLRVVRALGALGQVE
GIPILIRAFGFNRPAVGEAALEEVLRFGEAAVQPLLSHIDGFDYGARAYSVRALARIGHG
DAYPFLAEAIVADFAPSVRRAATRGLGRVAAKRPLPDQERALQLLRQCLADADWGVRYAA
VGSLTDLARQGEQSLRPSVEAALQMALEDADPLIPLRAQMSWQELAAEP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcctttgatcagcggtttcaagtgtacctttgactattcgttgcctatgtcctccgcc
tcggctgctcaagcgtttcccattgctgtggctcaactggcagcagaattggagcaggcc
acgtcgcctgaggaattgttgcgggtggtgagggcgctgggcgctttgggccaagtggaa
gggatccccatcttaattcgcgcctttgggttcaatcgccctgcagtgggggaagccgcc
ctggaggaagtgctgcgctttggggaagccgcggtgcagcccttgctgagccatattgac
ggtttcgattacggggcgcgggcctattcggtgcgggctttggctcgcattggccatggg
gatgcctacccctttttggcagaagccattgtggcggactttgcccccagtgtacggcgg
gcggcgacccgcgggctgggacgggtggcggccaagcggcccttgcccgatcaagagcga
gccttgcaactgttgcggcaatgtcttgccgatgccgattggggagtccgctacgccgcc
gttggatccctgacggacttggctcgccagggtgaacaatctctgcgaccctcagtcgag
gctgcgctccagatggccttggaagatgcggatcctctgatccctctccgcgcccagatg
agctggcaggaattggctgctgagccttag
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