KEGG   Cysteiniphilum sp. QT6929: NYP54_04930
Entry
NYP54_04930       CDS       T09052                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cys  Cysteiniphilum sp. QT6929
Brite
KEGG Orthology (KO) [BR:cys00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cys02044]
    NYP54_04930 (tssC)
Secretion system [BR:cys02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NYP54_04930 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WHN66577
LinkDB
Position
complement(1173012..1174511)
AA seq 499 aa
MTAENTQTLSAIEALLSSASLNATAVAQTPMVANAFSNVEENCSEENRLLASLAALMANA
EVEDFSAGFNKSIAQRIIDRIDNAINDQVNEIMHQPEFKHIESQFTSLADLVKDTNFQAN
IRIDFLDASKDELAEDFECNSVDIAGSSLFKKVYIAEYDQYGGEPYGSIVGLYEFDRSNE
DLDWLSTMGKISVASHAPFVSAVKPQFFGCDSVEELSQIKDLEGLMNHPKFGNWNKFRKT
EQATYVGLTLPRYVLRLPYDPEINPANKGLKGFKEDINPLNDNDYLWGSSAILFAKNLTK
SFERSGWCQHIRGPKAGGMVENLATHTFDIRGKEEAKPPVEFVIPDYREFEFAKCGFIPL
VYNKGTTEACFFSAQSAKYVETFEDPKDSENAQMISNLSYTYSITRIAHYVKSVMRDNIG
STADGAYIQNQLSKWLNDYVTAVTDPDDVTLQRFPFKTAKIEVNSVDGKIGWYNCKISVL
PHLQFEGMDAELKLDSRLA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacagcagaaaatacacaaactttaagtgcaattgaagctttactcagttccgcaagt
ttaaatgcaacagccgttgcacaaaccccaatggttgctaatgcgttttcaaatgtggag
gaaaactgcagtgaggaaaatcgcctgcttgcaagtctggcagcactcatggcaaatgcc
gaggtagaggactttagtgcgggctttaataaatcaattgcacagcggattattgatcgc
atcgataatgccattaatgatcaagttaatgaaatcatgcatcagccagagttcaaacat
attgaatctcaatttacctcattagcagacttagtgaaagataccaactttcaggccaat
attagaattgattttttagatgcgtctaaagatgaacttgctgaggactttgagtgcaat
agtgttgatattgcagggtcgtcattattcaaaaaagtttatatcgcagagtatgatcaa
tatggcggtgagccatatggttcaattgttgggctgtatgaatttgatcgttcaaatgag
gatctggattggttgtcaactatgggcaaaatatcagttgcctcacatgcaccatttgtg
tcagcagttaagccgcagttttttggctgcgactctgttgaagagttgtcgcagatcaaa
gaccttgaggggttaatgaatcaccctaaatttggtaattggaataaatttagaaaaaca
gagcaggcaacttatgttggtttgacactcccacgttatgtcttaagactgccttatgac
ccagagatcaatccagcaaacaaaggtcttaaaggctttaaagaagatattaatccatta
aatgataatgattacttatggggctcaagtgccatattgtttgctaagaatttaaccaaa
tcgtttgagcgctctggttggtgccagcatattcgtggtccaaaggcagggggcatggtt
gagaatcttgccacgcatacttttgatattcgtgggaaggaggaggcaaagccaccggtg
gagtttgtgattcctgattatcgtgagtttgagtttgctaagtgtggtttcattcctttg
gtatacaacaagggaacaacagaggcgtgtttttttagtgcgcaatcagcgaaatatgtt
gagacctttgaagatcccaaagactctgaaaacgcgcagatgatttcaaatctgtcatac
acttattcaattacacgaattgcgcattatgttaaatctgtgatgcgtgacaatattggt
tcaacagcagatggcgcttatatccagaaccaattatcaaagtggctcaacgattatgta
accgcagtaacggatccagatgatgtaacattacagcgattcccttttaaaacagccaag
attgaggtgaactctgtggatggaaaaatcggttggtataactgcaaaattagtgtgcta
cctcatcttcaatttgagggtatggatgctgagttaaagctagactctcgattagcttaa

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