Crocosphaera subtropica: cce_0644
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Entry
cce_0644 CDS
T00686
Symbol
sigB
Name
(GenBank) group 2 sigma-70 RNA polymerase sigma factor B
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cyt
Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyt03021
]
cce_0644 (sigB)
Transcription machinery [BR:
cyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
cce_0644 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_25
HTH_20
DUF2316
PocR
Motif
Other DBs
NCBI-ProteinID:
ACB49995
CyanoBase:
cce_0644
UniProt:
B1WQ73
LinkDB
All DBs
Position
650339..651325
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AA seq
328 aa
AA seq
DB search
MPTANVNTKTKQPTYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMSLLETKEELAQ
SLGKEPSLQEWAKEVNLEEKALTKALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGSLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKI
KKTQRELSQTLGRSATPAEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELL
EDQGVSPDIYITQELLRQDLSNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRLNISR
ERVRQLEHQALAQLRRRRGNVKEYLAAS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgctaacgttaataccaaaaccaaacagcctacgtactcagcagatatggtg
cggacttatctgcatgaaattgggcgggtacctctgttaacccatgaacaagaaattatt
tatgggaaacaagtccaaaaaatgatgagcttattggagacaaaagaggaactggctcag
agcctaggaaaagaaccaagtctccaagaatgggctaaagaggtaaacctagaggaaaaa
gccctcacaaaagctttagaacagggagaacgggctaaaagaaagatgatcgaggccaat
ttgcgcctggtggttgccattgccaaaaaatatcaaaaacgcaacatggaattccttgat
ctcattcaagaagggagtttaggactcgaaaggggtgtagagaaatttgacccgaccaaa
ggttataaattctccacctatgcctattggtggattcgtcaagctattacacgggcgatc
gctcaacaagcacgcaccatccgtttacctatccatattactgaaaagctcaataaaatc
aagaaaacccagagagaactctctcaaacgttgggcagaagtgctactcctgcggaaatt
gctcaagaattagaaattgaaccttcacaaattcgggagtttctcagtattgcccgtcaa
cccatttctttagacgtaagagtaggggacaaccaagacacagaactgtcagaattatta
gaagatcaaggggtttctcctgatatttacatcactcaagaactactccgccaagacttg
agtaacttaatggctgaattgacccctcagcaaagaaccgtactcaccctacgatttgga
ttagaagatggcaaagaactctccttagccaaaattggcaaacgactaaacattagtcga
gaacgagttcgtcaattagaacatcaagccctagcacaactgaggagacgacggggtaac
gtaaaagagtatttagcagctagttaa
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