Cycloclasticus zancles: CYCME_0047
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Entry
CYCME_0047 CDS
T02780
Symbol
xth
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYCME_0047 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_0047 (xth)
Enzymes [BR:
cza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CYCME_0047 (xth)
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CYCME_0047 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AGS38391
UniProt:
S5T3Q1
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All DBs
Position
complement(47059..47835)
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AA seq
258 aa
AA seq
DB search
MKIVSININGIRAGERKGFFNWVQQLDADVLCLQEIKAQEDQLTADTFWPANYHCFYHPA
EKKGYSGVAIFSKQKPDNVTKGIGWEDFDAEGRFIEAAFGNLRVSSIYMPSGSSKESRQA
FKYDLMDRLMPVLQEKQKDGKQHIICGDWNIAHKKIDIKNWRGNQKNSGFLPEERAWLDD
LFGKEGWGDAFRLVNQEAEQYTWWSNRGQAWANNTGWRIDYQVISENLKNTVANASIYKD
ERFSDHAPLIVDYDIPTA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtttcaatcaatattaacggcattcgcgctggcgaaagaaaaggctttttt
aactgggtacaacaactcgatgctgatgtactgtgcttacaagaaataaaggcccaagaa
gatcaactaactgccgataccttctggcccgctaattaccattgtttctaccatcctgcc
gaaaagaaaggttacagcggcgtcgccattttttccaagcaaaagcctgacaatgtaact
aaaggtattggttgggaagactttgatgccgagggtcgctttattgaagccgcctttggc
aacctaagggtatcatctatttacatgccatcggggtcctcaaaagaatcccgccaagcc
tttaagtacgacttaatggatcgattaatgcccgtgctacaagaaaaacaaaaagatggc
aaacaacatattatttgtggggactggaatattgcacataaaaaaatagacattaagaac
tggcgcggaaatcaaaaaaactctggttttttacccgaagagcgcgcctggctagacgat
ctatttggcaaagaaggctggggtgatgcctttcgccttgtgaaccaagaagctgaacaa
tatacatggtggtccaaccgaggacaggcgtgggccaataacactggctggcggatagat
taccaagttatttcagaaaacttaaaaaatacggttgccaatgcatccatctataaagat
gagcggttttctgaccatgcccccttgattgttgattacgacatccctacagcctaa
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