Frigidibacter mobilis: AKL17_0417
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Entry
AKL17_0417 CDS
T04387
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
daa
Frigidibacter mobilis
Pathway
daa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
daa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AKL17_0417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daa03021
]
AKL17_0417
03400 DNA repair and recombination proteins [BR:
daa03400
]
AKL17_0417
Enzymes [BR:
daa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AKL17_0417
Transcription machinery [BR:
daa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AKL17_0417
DNA repair and recombination proteins [BR:
daa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AKL17_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMY67678
UniProt:
A0A159Z137
LinkDB
All DBs
Position
407357..411649
Genome browser
AA seq
1430 aa
AA seq
DB search
MARVAKTLFKARFKVRVLAGGTVGGNGTLSPSFGGVFRGPDGTRAQRRKVTTSMAQSYVG
QKRIRKYFGKIREVLEMPNLIEVQKSSYDLFLKSGDGPKPQDGDGIQGVFQSVFPIKDFN
ENAILEFVKYELEKPKYDVEECQARDMTYAAPLKVTLRLIVFDIDEDTGAKSVKDIKEQD
VYMGDMPLMTPNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFACRIIPYRG
SWLDFEFDAKDIVFSRIDRRRKLPVTTLLYALGLDQEGIMDAYYNTITYKHLKNRGWVTR
FFPERVRGTRPTYDLVDAATGEVICKAGDKVTPRLAKQLIDEGKVTELLVPFEHIVGRYV
AKDIINEETGAIYVEAGDEITLTYDRDGEVNGGTLKVLLDNGVTDIPVLDIDNINVGPYI
RNTVAADKNIGRDGALMDIYRVMRPGEPPTIEAASNLFESLFFDSERYDLSAVGRVKMNM
RLDLDAPDTQRTLRKDDIIACIKALVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVG
LLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHATHYGRMCPIETPEGPNIGLINSLATYARVNKYGFI
ETPYRKVVDCKVTDDVQYMSATEEMRHTVAQANAQLDADGRFVNDLVSTRQSGEFMLNPP
EAVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQADAPFVGTGIEAI
VAQDSGAAIMARRGGIIDQVDATRIVVRATEDLEMGDAGVDIYRLRKFQRSNQNTCINQK
PLVKVGDRVAKNEVIADGPSTDMGELALGKNVIVAFMPWNGYNYEDSILISERIVKDDVF
TSIHIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVGPGDILVGKIT
PKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGDYGTVVEVRVFNRHGVDKDERALQI
EREEVERLARDRDDELAILERNTYARLKSTILGKTAVKGPKGIKAGTEVTEELLETLSRG
QWWQLALGEEADAQQVEALNGQFEVQKRALDHRFEDKVEKVRRGDDLPPGVMKSVKVFVA
VKRKLQPGDKMAGRHGNKGVVSKVVPIEDMPFLGDGTPVDMVLNPLGVPSRMNVGQILET
HMGWAARGLGIRIDDALQDYRRTGDLTPVRDALRHGYGDDVYEEAFAGMDEETLLDRAGN
VKRGVPIATPVFDGAKEADVNDALTRAGFDTSGQSELFDGRTGEQFARKVTVGVKYLLKL
HHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKS
DDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEDE
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgggtggcaaagaccctcttcaaggcgcggttcaaggttcgggtgctggccggt
gggacggttggcgggaatggaaccttatccccttcattcggcggcgtgttccgtggcccc
gacggaacgcgcgcgcagagacgaaaggtgacgacgagcatggctcagagctacgttggc
cagaagcgcatccgcaagtacttcggcaagatccgtgaagtcctcgaaatgccgaacctc
atcgaggttcagaaatcctcctacgacctgttcctgaagtccggcgacggaccgaagccg
caggacggagacgggattcaaggtgtgttccagtcggtgttcccgatcaaggatttcaat
gagaatgccattctggagttcgtgaaatacgagcttgagaagccgaaatacgatgtcgag
gaatgccaggcgcgcgacatgacctatgccgcaccgctgaaggtcacgctgcggctgatc
gtgttcgatatcgacgaggataccggggccaagtcggtcaaggacatcaaggaacaggac
gtctacatgggcgacatgcccctgatgacgcctaacgggacgttcatcgtgaacggtacc
gagcgggtgatcgtgtcgcagatgcaccgctcgccgggcgtgttcttcgaccatgacaag
ggcaagacccattcgtcgggcaagctgctcttcgcctgccggatcatcccctatcgcggt
tcgtggctggacttcgagttcgacgccaaggacatcgtgttctcgcgcatcgaccgtcgc
cgcaagctgccggtgacgacgctgctctatgccctggggctcgaccaggaaggcatcatg
gatgcctattacaataccatcacctacaagcacctgaagaaccgcggctgggtcacgcgc
ttcttcccggagcgtgttcgcggcacccgcccgacctatgaccttgtcgacgccgccacc
ggcgaagtgatctgcaaggccggcgacaaggtgaccccgcgcctggcaaagcagctgatc
gacgagggaaaggtcaccgaacttctggtgcccttcgagcatatcgtcggccgctatgtt
gccaaggacatcatcaacgaggaaaccggcgcgatctatgtcgaggccggggacgagatc
accctgacctatgaccgtgacggcgaggtgaatggcggcacgctcaaggtgctgctggac
aatggcgtgaccgatatcccggtgctggacatcgacaacatcaacgtcggcccgtacatc
cgcaacaccgtggccgccgacaagaacatcggccgcgatggcgcgctgatggacatctac
cgcgtgatgcgcccgggcgagccgccgaccatcgaggctgcctcgaacctgttcgagagc
ctgttcttcgactccgagcgctatgacctgtcggccgtgggccgggtcaagatgaatatg
cgtcttgacctcgatgcgccggacacgcagcgcacgctgcgcaaggacgacatcatcgcc
tgcatcaaggcgctggtcgaactgcgcgacggcaagggcgagatcgacgacatcgaccac
ctcggcaaccgtcgcgtgcggtcggtcggcgagttgatggagaaccagtatcgcgtcggc
ctgctgcgcatggaacgggcgatcaaggagcgcatgtcctcggtcgagatcgacacggtg
atgccgcaggaccttatcaacgccaagccggctgcggcggcggtgcgtgagttcttcggc
tcctcgcagctgtcgcagttcatggaccagaccaacccgctgtcggaagtgacgcacaag
cgccgtctctcggccctggggccgggcggtctgacccgcgaacgtgccggcttcgaggtg
cgtgacgttcacgccacccactatggccggatgtgcccgatcgaaacgccggaaggcccg
aacatcggccttatcaacagccttgcgacctatgcccgcgtgaacaagtacggcttcatc
gagacgccgtatcgcaaggtcgtggactgcaaggtgaccgacgacgtgcagtacatgtcg
gcgaccgaggaaatgcggcacacggttgcgcaggcgaacgcgcagctggatgccgatggc
cgcttcgtcaatgatctggtgtcgacccgccagtcgggcgaattcatgctgaacccgccc
gaagcggtggacctgatcgacgtgtcgccgaaacagctggtttcggtcgcggcctcgctg
atcccgttccttgagaatgacgacgcgaaccgcgcgctgatgggatcgaacatgcagcgg
caagccgtgccgctgctgcaggccgacgcgcccttcgtgggcaccgggatcgaggccatc
gtggcccaggattccggcgccgcgatcatggcgcgccgcggcgggatcattgaccaggtg
gacgccacccggatcgtggtccgcgccacggaagacttggaaatgggcgatgccggcgtc
gacatctaccgtctgcgcaagttccagcgctcgaaccagaacacctgcatcaaccagaag
ccgctggtgaaggtgggcgaccgggttgccaagaacgaggtcatcgccgatggcccctcg
accgacatgggcgagctggcacttggcaagaacgtcatcgtcgcgttcatgccgtggaat
ggctacaactatgaagactcgatcctgatctcggaacggatcgtcaaggatgacgtcttc
acctcgatccatatcgaggaatacgaagtcgccgcccgtgacaccaagctggggccggaa
gagatcacccgcgacattccgaacgtcggcgaggaagccctgcgcaacctcgacgaggcc
gggatcgtctatatcggtgccgaagtcggcccgggcgacatccttgtcggcaagatcacc
ccgaagggcgagagcccgatgacgccggaagaaaaactcctgcgcgccatcttcggcgaa
aaggcatcggacgtgcgcgatacctcgctgcgtctgccgccgggggattacggcacggtc
gtcgaagtgcgggtgttcaaccggcatggcgtggacaaggacgaacgcgccctgcagatc
gagcgcgaggaagtcgagcggcttgcccgcgaccgcgatgacgaactggcgatcctggag
cgcaacacctatgcgcgcctgaaatcgacgatccttggcaagacggccgtgaaaggcccg
aaaggcatcaaggccggcaccgaagtgaccgaagagctgctggaaacgctgtcgcgcggc
cagtggtggcagcttgcgctgggcgaggaagccgatgcgcagcaggtcgaggccctgaac
gggcagttcgaggtgcagaagcgcgcgctcgatcaccgcttcgaggacaaggtcgagaag
gtgcgccgcggcgacgatctgcctccgggcgtgatgaagtcggtcaaggtgttcgtcgcg
gtcaagcgcaagctgcagccgggcgacaagatggccggccgtcacggcaacaagggtgtg
gtgtccaaggtggtgccgatcgaggacatgccgttcctgggcgatggcaccccggtcgac
atggtgctgaacccgctgggcgtgccgtcgcgcatgaacgttgggcagatcctggaaacc
catatgggctgggccgcgcgtggtttgggtatccgcatcgacgacgcgctgcaggactat
cgccggaccggcgacctgacccctgtgcgcgatgcattgcgccacggctatggcgacgat
gtctatgaagaggccttcgccggcatggacgaggaaacgcttctggaccgcgccggcaac
gtcaagcgcggcgtgccgattgcgaccccggtcttcgacggtgccaaggaagccgacgtg
aacgacgcgctgacccgtgccgggttcgacacgtcgggccagtcggagctgttcgacggg
cgcaccggcgagcagttcgcgcggaaggtgacggtgggtgtgaaatacctgctgaagctg
caccaccttgtcgatgacaagatccacgcgcgctccaccgggccctacagcctcgtcacg
cagcagcctctgggtggtaaagcccagttcggcggccagcgcttcggcgagatggaggtc
tgggcactggaagcctacggcgccgcctacaccctgcaggagatgctcaccgtcaagtcg
gatgacgtggcgggccgcaccaaggtctacgagtccatcgtcaagggcgaggacaacttc
gaggctggcgtgccggagagcttcaacgtgctggtgaaagaggtccggggcctcggcctc
aatatggaactcctggatgcggaggacgagtga
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integrated database retrieval system
