Desulfurivibrio alkaliphilus: DaAHT2_0707
Help
Entry
DaAHT2_0707 CDS
T01244
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DaAHT2_0707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_0707
Enzymes [BR:
dak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DaAHT2_0707
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DaAHT2_0707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADH85411
UniProt:
D6Z1F6
LinkDB
All DBs
Position
838823..842386
Genome browser
AA seq
1187 aa
AA seq
DB search
MPVERRLILYRSNRLEALLDCLAASLQDDPPPPLSSECVVVQSRGMATWLGQSLAQRFGI
WAHPDFPHPRRFIERLLRAAAGEEAATATSFSRELLTLAILELLPQLLSRPEFAPLRRYL
EGADDWKSLQLAERIAYVFDQYLVYRPEMVLAWEDRQAEPEDDDRWQALLWRQLAQRFGS
PARLFHQAKGRLQQGDLAQPELLPARVFLFGITTLPPVYLDLLNEAAKLLPCHLLLFAPA
RDYWGDILSPKAANRLLLRHHPPAANADEQHGRDFEHLHLDTGHPLLASWGEVGREFQHI
MEERAEYLQPAHGDCFVNPATVEVAGASILARLQRDILELQEPAPAAADQRNSAGDSPNP
NNRLPEQAAGAVDHDHSIVIHACHSPLREVEVLQDQLLAMLDVEGYRPRDIVVMVPDIET
YAPLIEAVFRRPTGDRRYIPFRLADRRVSREAPLLDALLNLLDLARGRLPLSQVLDFLAR
EPVRQGFGLDGRQLQRLEQWLEQLRVRWGIDEEHRRRHDQPPDRQNTWRFGLDRLILGYA
LPGEDRYLVAGILPFDDIEGQDAQLAGVLLQFSQALFSLVDEVREAKTMARWVELVRRAM
AAFFAPEERAAAGEQWQRQSLRDALVALLQESERAGLERPLELAAFLRLLRARLDEAGMA
AGFLEGGLTFCTMLPMRTIPFPVVCLLGMNDGDFPRQDNPAGFDLLAAAPRPGDRSRRRD
DRYLFLESLLSARRRLYISYVGRSIKDNTELPPSPLVDELLDCLERMPEAVAESTADSEG
TGEEERLADRRRRTRARFVVNHPLQPFSPRYFQPDQPLLFTYAAEYAPVPSTRPVGTGQG
GPDSPRPKAAATAPAPGAPTLAELHRFFRNPSRWYAEHHLGLSLPPGEEARPDREPVFLE
RLDAYRLNRQLLQDPASVLAAVNAGEDDEAGRRLRHLLAARGELPLAGAAAPALAEAMAA
VEPVAAFLATNPAGRPLPNLPLDLELGQHLYLRGELRDRAELGLLRWRPGRSKPVFLLLA
WLDHLALCARAPADQDHQCLLVARGKGQDEGQADIRIFRAVAQEQAQSLLAQLLDLWRRG
QEAPLPFFPACSHAWSDKIYQAKESDPAKLCRQARQAALQAYHGGDFHPGDGADPYVGLI
FQEADPAGEWSEDDSSGPGGSDWEEFTAVAETVYLPMLRVLEKAGEK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgttgaacgccgcctgatcctttaccgcagcaatcgcctggaggccttgctggac
tgcctggcggccagcctgcaagatgatccgccgcctcccttaagcagtgaatgtgtagtg
gtccagagccggggcatggctacctggctggggcaaagcctggcccagcgtttcggcatc
tgggcccatcccgatttcccccacccccgccgtttcattgaacgcctgctgcgggccgct
gccggagaggaggcggccaccgccacttctttcagccgggagctgctgaccctggcgatt
ctcgagttgttgccgcagttgctctcccggccggagtttgcccccctgcgccgttacctg
gagggggcggacgattggaaaagtctgcaactggcggaacggatcgcctatgttttcgac
cagtacctggtgtatcggcccgaaatggtgctggcctgggaagaccggcaagctgaaccg
gaggatgacgaccgctggcaggcgctgctgtggcggcaactggcgcaacgcttcggctcc
ccggcccgcctttttcaccaggccaaaggtcgcctgcagcagggcgatttagcccaaccc
gagttgctgcccgcccgggttttccttttcgggatcaccaccctgcctcccgtgtacctc
gatttgctcaatgaggcggccaaactgctgccctgccacctgctgctctttgccccggcc
cgtgactactggggcgatatcctcagccccaaggccgccaaccggctgctgttgcgccat
caccccccggcagccaacgccgatgaacagcatggaagagatttcgaacacttgcacctg
gataccggccacccgctgctggcttcctggggagaggtggggcgggaattccaacatatc
atggaagagcgggccgaatacctgcaacctgcccacggtgattgctttgtcaatcctgca
accgtcgaagttgccggggcctccatcctggcccgcctgcaaagagatatcctggagttg
caggagcccgccccagcggccgctgaccaacggaattctgccggcgacagcccgaacccc
aacaaccggttgcctgaacaagcggcgggggcggtagaccatgatcactccattgtcatt
catgcctgccacagccctttgcgggaggtggaagttttgcaggaccagcttctggccatg
ctggatgtcgagggttaccggccccgggatatcgtggtcatggtgccggatatcgagacc
tacgcccccctgatcgaagcggtttttcgccgacccaccggtgatcgccgctacatccct
tttcgccttgccgaccgccgggtcagccgggaagcgccgcttctggatgccctgttaaac
ctgctcgacctggcccgcggccggctgccgctgtctcaggtgctggattttctcgcccgg
gagccggtgcggcaaggtttcgggctggacggccggcagttgcagcgccttgaacagtgg
ctggagcaactgcgggtgcgctgggggattgatgaagagcaccgccgtcgccacgaccag
ccgccggaccgccaaaacacctggcgtttcggcctggaccggttgatcctcggttacgcg
ctgcccggcgaagatcgctatctggtggccggcatactgcccttcgacgacattgaaggc
caggacgcccagctggcaggggtactgctgcaattcagccaggccctgttcagcctggtc
gacgaggtgagagaagccaaaaccatggcccgctgggtggagctggtgcgccgggccatg
gccgcctttttcgccccggaggaacgggcggcggcgggggaacagtggcagcggcaaagc
ctgcgcgatgccctggtagcgctgcttcaggagagcgagcgggcggggctggagcgcccc
ctggagttagcagcctttctgagactgctgcgcgcccgcctggacgaggcaggcatggct
gccggctttctggaaggcggcctgaccttctgcaccatgctgcccatgcgcaccattcct
ttcccggtggtctgcctgctgggaatgaacgacggcgatttcccccgccaggacaacccc
gccggcttcgacctgctggccgccgccccccgtcccggtgaccgctcccgccgccgggac
gaccgctaccttttcctggaatcactgctctccgcccgccggcggctttatatcagctac
gtgggccgcagcatcaaagacaacacagaactgccaccctcgcccctggtggatgaattg
ctggactgcctggagcggatgccggaggctgtcgcagaaagcaccgcagatagtgagggt
accggcgaagaagagcgcctggccgaccgccgccggcgtacccgcgcccgttttgtcgtc
aaccaccctctgcagcccttcagcccgcgctatttccagccggaccagccgctgctgttt
acctatgccgctgaatatgcacccgtgccaagcacccggccggtcggcaccgggcagggt
ggcccggattccccgcggcccaaggccgccgccactgcccccgccccaggcgcccccacc
ttggccgaactgcaccgtttttttcgtaatccatccaggtggtatgccgaacatcacctg
ggcctgagcctgccgccaggcgaagaggcccggccggaccgggaaccggttttcctggaa
agattggatgcataccggctgaaccggcaactgctgcaagatcccgccagcgtgctggcg
gctgtgaacgccggggaagatgacgaagcgggtcgccggctccggcacctcttggccgcc
cggggcgagttgccgttggccggggccgccgccccggccctggcggaagccatggccgcc
gtcgagccggtggccgcctttctggccaccaatcccgccggccgtcccttgccgaatctg
ccccttgaccttgagcttggacagcacttgtatttgcgcggtgagctgcgggaccgggcc
gagctgggcctgctgcgctggcggcccggccgaagcaagccggtttttctgctgctggcc
tggcttgaccacctggccttgtgcgcccgggccccggccgaccaagaccaccagtgcctg
ctggtggccaggggtaaggggcaagacgaaggccaggcggatatccgcatttttcgggcg
gtggcgcaagagcaggcccaaagcctgctggcccaactgctcgacctgtggcgacggggg
caggaagcgccgctgccttttttcccggcttgctcccacgcctggtcagataagatttac
caagccaaagaaagtgaccccgcgaaactttgccgccaggcccgacaggccgccctgcaa
gcgtaccacggcggagattttcatccgggtgacggggccgacccttacgtggggctgatc
ttccaggaggcggacccggcgggtgagtggtcggaggatgacagctcggggcccggcggg
agcgactgggaagaattcactgcggtggccgaaaccgtttacctccccatgctccgagtt
ttggaaaaagctggagaaaaatga
DBGET
integrated database retrieval system
