Desulfobacca acetoxidans: Desac_2566
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Entry
Desac_2566 CDS
T01454
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desac_2566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_2566
Enzymes [BR:
dao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Desac_2566
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Desac_2566
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desac_2566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEB10384
UniProt:
F2NII2
LinkDB
All DBs
Position
2844202..2845026
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AA seq
274 aa
AA seq
DB search
MPELPEVEVIRRGLAKKLVGDKIIAVDLGRQRLRRQALDSELASLVGHTFSRLTRRGKYL
LLHLDQGQTLLVHLAMTGRLLLQTNSCPLPPHVHLTLHCQTGHKLLYQDMRRFGQILLYP
PGKRPPALEQVGWEPFSRGLTPEWLRQKTVRLTRPVKNFLLDGRFIAGIGNIYASETLFE
ARVHPQTPVGRIDLKTWETLLRAIRRILRRAIKAGGTTIVNYVDCDGQSGLFGVQLKVYG
RAGSPCPVCQTPITRLVMAGRSTFFCPTCQPINL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacttccggaagtggaggttatacgccgcgggttggcaaagaaactggtaggc
gataagatcattgccgttgatttgggtaggcagcgactgcggcgacaggccctcgatagc
gaactggcctcattggtggggcacacgttcagccggttgacccggcggggcaaatatctc
ctgctgcacctggatcaggggcagacgctgctggtacatctagccatgaccggacgcctg
ctcctgcaaacgaactcctgcccgctgccgccccacgtccacctcaccttacactgccag
accggtcataaactgctgtaccaggacatgcgccgcttcggccagatactcctctatcct
cccggcaaaaggccgccagctctggagcaggtaggatgggagcccttttcccggggctta
acccccgagtggctgcgccaaaagacggtgcgactaaccaggccggtgaaaaatttcctg
cttgacggccgcttcatcgccggcatcggcaatatctacgcctctgagacactctttgag
gccagggtgcaccctcagaccccggtgggccggatcgacctcaagacttgggaaactttg
ttgcgcgccatccgacgtatcctgcgccgggccatcaaggccggcggcaccaccatcgtc
aactatgtggactgcgacgggcaatcaggcctgtttggcgtgcagctcaaggtctatggc
cgggctggcagcccttgcccagtctgccagacccccattacccgcctggtcatggccggg
cgcagcaccttcttctgccccacctgccagccgatcaacctttaa
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