Dickeya aquatica: DAQ1742_00748
Help
Entry
DAQ1742_00748 CDS
T06021
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
daq
Dickeya aquatica
Pathway
daq03410
Base excision repair
daq03430
Mismatch repair
daq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DAQ1742_00748 (recJ)
03430 Mismatch repair
DAQ1742_00748 (recJ)
03440 Homologous recombination
DAQ1742_00748 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_00748 (recJ)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DAQ1742_00748 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DAQ1742_00748 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DAQ1742_00748 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
SLM61821
UniProt:
A0A375A776
LinkDB
All DBs
Position
746053..747783
Genome browser
AA seq
576 aa
AA seq
DB search
MNVVTQLRRRPVVSTQLPDTLPDLLRRLYAQRGVTQPQELERSLRGLLDYRQLHGINQAV
SVLEQALSLHRRIVIVGDFDADGATSTALTVLALRSMGAREVQYLVPNRFEDGYGLSPEV
VAQAAAKGAELIVTVDNGISSHAGVDDAHQRGIAVVVTDHHLPGDTLPAAQAMINPNLPD
CTFPSKALAGVGVAFYLMMALRARLRESGWFSAQGIAEPNLAELLDLVALGTVADVVPLD
ANNRILVAQGLGRIRAGKCRPGIRALLEVANREASQLVASDLGFALGPRLNAAGRLDDMS
VGVELLLCQDIAQARMLAFELDALNQSRREIEAGMQVEALQLCEQLERSRDTLPLGLAMY
HPQWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSGRSIAGLHLRDALERLDTCYPG
MMLKFGGHAMAAGLSLMESRFDEFRVRFAELVGEWLDVSQLEGVVWSDGELAMTELTLDT
AEMLRDAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVETTR
WPDQSVREVELAYKLDVNEFRGKRTVQLLIEHLWPL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtcgttacccaactccgtcgtcgtccggtggtgtcgacgcaattgcccgatacc
ctgcccgatttgctgcgccgcttatatgcccagcgcggcgtaacacagccgcaggaactg
gagcgcagcctgcgtggcctgctcgattatcgccagttacatggcattaaccaggcggtc
agcgtgctggagcaggcgctgtcgttgcatcgtcgcattgtcattgtcggcgattttgat
gcggatggagccaccagcacggcgttgaccgtgctggcgctgcgcagtatgggcgcacgc
gaggtgcagtatctggtgcccaatcgctttgaagatggctacgggcttagccctgaggtg
gtggcgcaggccgcggccaaaggggctgagctgattgtcaccgttgataacggtatttca
tctcatgccggggtggatgatgcgcatcagcgcggtattgccgtcgtggtgacagaccac
catctgcccggcgacaccctgccggcggcgcaggcgatgatcaaccctaacctgccggat
tgtacctttccctcaaaagcgctggcgggtgttggtgtcgcgttctatctgatgatggcg
ttgcgtgcgcggctgcgcgaatccggctggtttagcgcacaggggattgccgagcccaat
ctggctgagctgcttgatttggtcgcacttggcacggtagccgatgtggtgccgcttgat
gccaataaccgtattttagtggctcaagggctgggtcgcattcgtgcaggcaaatgccgg
ccggggatccgggcactgctggaagttgctaatcgcgaggcctctcaactggtggcaagc
gatctcggatttgccctgggcccgcggttgaatgccgcaggccgtctggatgatatgtcc
gttggcgttgagctgctgctgtgtcaggacatcgcccaggcgcgcatgctggcttttgag
cttgatgcgttaaaccaaagccgccgcgaaatagaagcgggaatgcaggtggaagcatta
cagctctgcgagcagttagagcgcagccgcgataccctgccgttggggctggcgatgtac
catccgcagtggcaccagggggtggtggggattctggcttcccgcatcaaagagcgcttt
caccgcccggtaattgcgtttgcacccgccggggagggtatcctgaaaggctcgggtcgc
tcgattgccgggctgcacttgcgtgatgcgctggagcgcctcgatacctgttaccctggc
atgatgctgaagtttggcggccatgcgatggcggctggattgtcgctgatggaatcccgg
tttgacgagttccgtgtgcgctttgccgaactggtgggcgagtggcttgatgtttctcag
cttgaaggcgtggtgtggtcagatggcgaactcgccatgacagagctgacgctggatacc
gctgaaatgctgcgtgatgctggcccctgggggcaggcgtttcctgagccgacgtttgac
gggcgttttcgcctgctgcaacagcggctggtgggagagcgccacctcaaggtaatggtt
gagccgctgggcggaggcccgctgcttgacggtattgcgtttaatgttgaaaccacccgc
tggcctgaccaaagtgtgcgcgaagtggagctggcctacaaactggacgtcaatgagttt
cgtggtaaacgcacggtgcagttgctgatagaacacctctggccgttgtaa
DBGET
integrated database retrieval system
