Dickeya aquatica: DAQ1742_04435
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Entry
DAQ1742_04435 CDS
T06021
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
daq
Dickeya aquatica
Pathway
daq03030
DNA replication
daq03430
Mismatch repair
daq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAQ1742_04435 (dnaN)
03430 Mismatch repair
DAQ1742_04435 (dnaN)
03440 Homologous recombination
DAQ1742_04435 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daq03032
]
DAQ1742_04435 (dnaN)
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_04435 (dnaN)
Enzymes [BR:
daq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DAQ1742_04435 (dnaN)
DNA replication proteins [BR:
daq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DAQ1742_04435 (dnaN)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DAQ1742_04435 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
SLM65180
UniProt:
A0A375AGH5
LinkDB
All DBs
Position
complement(4445010..4446110)
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHLALT
QPHEPGATTVPARKLFDICRGLPDGAEISVTLEGDRMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLAQATLKRLIEATQFSMAHQDVRYYLNGMLFETGGDELRTVATDGHRLAVC
AMPVGQSLPSHSVIVPRKGVMELVRLLDGGETPLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEASCDLLRQAFSRAAILSNEKFRGVRLYLNQNQLRITANNPEQE
EAEEILDVEYGGSEMEIGFNVSYVLDVLNALKCEDVRLLLTDSISSVQIEDAASQAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgttgagcgtgagcatctgttaaaaccgttacagcaggtcagtagcccg
ctgggcgggcggccgacattacctatcctcggcaacctgttattgcaggtgagcgaaggg
cgtttgtcgttgaccggtactgacctggaaatggaaatggtggcccatctggcgctgacg
cagcctcatgagccgggtgcgacgacagtgccggcgcgtaagctgttcgacatttgccgg
ggcttgccggacggggcggagatttccgtcacgctggagggcgaccggatgctggtgcgc
tccgggcgcagccgtttttcattatcgacgctgcccgctgctgacttcccgaatctggat
gactggcaaagcgaggtggaattcaccctggcgcaggcaacgctaaagcgcctgattgaa
gccacccaattctcgatggcgcatcaggatgtgcgctactacctgaacggcatgttgttt
gaaaccggcggcgacgagttgcgtaccgttgccaccgacggccaccgtctggcggtgtgt
gctatgccggtcgggcagtcgttgccgtcgcattcggtgatcgtgccgcgtaaaggcgtc
atggaactggtgcggttgttggatggcggtgaaacaccgctgcaactgcaaatcggcagc
aacaatattcgcgcccatgtcggcgattttatctttacctccaagctggtggatggccgc
ttcccggattatcgccgcgtgctgccgaaaaacccggataaaacgctggaagcgagctgc
gatttgttgcgtcaggcgttctcccgcgcggcgattctgtcgaatgagaaatttcgtggc
gtgcgtttgtacttaaaccagaatcaactgcgtattaccgccaataaccccgagcaggaa
gaagcggaagagattctggatgtggaatacggcggcagcgaaatggaaatcggttttaat
gtcagctatgtgctggatgtgctcaatgcgctgaaatgtgaggatgtgcggctgctgctg
accgattccatttccagcgttcagattgaggatgccgcaagtcaggccgccgcctacgtg
gtgatgccgatgcgcctgtag
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