KEGG   Dechloromonas aromatica: Daro_1308
Entry
Daro_1308         CDS       T00259                                 
Name
(GenBank) Type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dar  Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:dar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dar02048]
    Daro_1308
Enzymes [BR:dar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Daro_1308
Prokaryotic defense system [BR:dar02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Daro_1308
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII DEAD HSDR_N_2 DUF4080 DUF4274 DUF6800
Other DBs
NCBI-ProteinID: AAZ46059
UniProt: Q47GH2
LinkDB
Position
1419442..1422675
AA seq 1077 aa
MTTVLTAKEVTAAYGELVLVELPAMDRFASLGWAVANLYNETFGQDGTEGRTSEAEVILT
RRLRKALERINPGYSASAYDQAIEQLTEDRSKQLPVNANQAFYKLLRDRVKVEITDNEGN
PQTVELTVIDWRNPENNDFFLTQQMWVSGEMYKRRCDLVGFVNGIPLVFIELKAPHVPLK
SAYDDNLKDYKGQSIPQLFHPNAFILLSNGSQTRIGTLTSPWEHFFEWRRIDDETEAGST
SLDTAIRGMCDKRRLLDIVENFTIFEEARGGLIKKVAKNHQYLGVNKAIAQMIKLRESGD
VEAAKRLGVFWHTQGSGKSLSMVFFTQKILRTLPGKWTFLIVTDREELDDQISKTFKATG
AIPNAKLGGTKDNILVRAASSNHLKQLLKTDERYIFTLIQKFRTEAGAQYEKLSDRSDII
VITDEAHRSQYDIFALNMRNALPHAAFLGFTGTPLIAGEEERTREVFGDYVSVYDFARSI
EDGATVPLYYENRTPELQITNQNLNKDIEKLLEEAELDEAQEQKLEREFAREYHLITRDD
RLETIAEDLVKHFLGRGYRGKAMMVCIDKATAVRMYDKVQAYWQQHLAELHEKLTKATGD
DKEILAEKIMVMDTTDMAVVVSQSQNEIEDLKAKGLDIVPHRQRMLKEDLDEQFKDPDGN
LRLVFVCAMWITGFDVPTCSTLYLDKPMRNHTLMQTIARANRVSPGKSAGLIVDYVGIFR
NLQDALRIYAKPNQPGQLPINDKAALVAQLEALLERAESFCTDLGINLKGVVNTPPEKRL
EALQEAMNTILGEGENTTKAYLLLAGQVARTFKSILPDAAANAYAPMSVLVAYLGAMIKA
LRPPPDISDVMNDLDALLDDSIATEGYRIGHKPEAEALIDLSQIDFAALQEKFAEGKKAT
ETEKLKGQIEQKLEKMVRENKGRTDFLEKFQKLIDAYNSSSHNLEAFFKELLAFAQNLTE
EEQRAHRENLSEEELAIFDLLTQPEPALSEKEKDEVKKVAKELLAKLKAEKLVLDWKLKT
QTKADVERTIRDFFIKLPSAYTPALKKDKRVKTYAHVYENYFGAGQSVYQRGAAGAH
NT seq 3234 nt   +upstreamnt  +downstreamnt
atgaccaccgtcctcaccgctaaggaagtcaccgccgcgtacggagaactcgtcctcgtc
gagttacccgcaatggatcgctttgcttccctcggctgggcggtcgccaacctatacaac
gaaaccttcgggcaggatggcaccgaggggcgtacctcagaagcagaggtcattctcacc
cggcgactccgcaaggcgctggagcgcatcaatccgggctactcggcatcggcttatgat
caggccattgaacaactgaccgaggaccgctcgaagcagttgccggtcaatgctaaccaa
gcgttctacaagttgctgcgtgatcgggtaaaagtagagatcaccgacaacgagggcaac
ccacagaccgttgaactcacggtcatcgactggcgaaatcctgagaacaacgacttcttt
ctgacccagcagatgtgggtttcgggtgagatgtacaaacgccgctgcgaccttgtaggc
ttcgtgaatggcatccctctggtattcatcgaactgaaggctccccacgtccccctgaag
tctgcctacgacgacaacctgaaggactacaagggccagagcatcccgcaactgttccac
cccaacgccttcatcctgctgtcgaatggatcgcagacccgcatcggcaccctgaccagc
ccctgggaacacttcttcgagtggcggcgcattgatgacgagacagaggctggctccacc
tcactggatacggccatccgggggatgtgcgacaagcggcgactgctggacatagtcgag
aacttcaccatctttgaggaggcccgtggtggcctgatcaaaaaggttgccaagaaccac
cagtacctcggggtcaataaagccatcgcccagatgatcaagctgcgcgaatcgggggat
gtcgaggccgccaagcgtctgggcgtcttctggcacactcagggcagcggcaagagcctg
tcgatggtcttcttcacccagaagatactccgcaccctccccggcaaatggaccttcctg
atcgtcactgatcgggaggaactggacgaccagatcagcaagacgttcaaggccacgggg
gcgatccccaatgccaagctcgggggcaccaaggacaacatcctggtcagggctgccagt
agcaaccacctgaagcagttgctgaaaactgacgagcggtacatcttcacgctgatccag
aagttcaggaccgaggccggggcgcagtacgagaagctctcggatcgtagcgacatcatc
gtcatcaccgacgaagcccaccgcagccagtacgacatcttcgccctcaacatgaggaac
gccctgccccatgcggcctttctagggttcaccggcaccccgctgatcgctggggaggag
gagcgcacccgtgaggtcttcggcgattacgtctcagtctatgacttcgcccggtctatc
gaggacggggccaccgtaccgctctactacgagaaccgcaccccggaactccagatcacc
aaccagaacctcaacaaggacatcgagaagctcctcgaagaagccgaattggatgaggct
caggaacaaaaactggagcgtgagtttgctagggaataccacctgatcactcgggatgat
cggctggagaccattgccgaggacttggtgaagcatttccttgggcgtggctatcgtggc
aaagcaatgatggtctgtatcgacaaggccaccgcagtgcggatgtacgacaaggtgcaa
gcctactggcaacagcatctggctgaactccatgagaaactcaccaaggccaccggggac
gacaaggagatactggccgagaagatcatggtgatggacaccaccgacatggccgtggtc
gtctcccagtcgcagaatgagatcgaagacctcaaggccaagggcttggacatcgtcccc
caccggcagcggatgctgaaggaagacctcgacgagcagttcaaagaccccgacggcaat
ctgcgactggtcttcgtctgcgccatgtggatcaccggcttcgatgtgccgacctgttcc
accctttacctcgacaagccgatgcggaaccacaccctgatgcagaccatcgcacgggcc
aaccgcgtatcgccgggcaagagtgctggcctgatcgtcgattacgtgggcatcttccgt
aaccttcaggacgccctccgcatctacgccaagcccaaccagccgggacaactgccgatc
aacgacaaagctgccctggtcgctcaactggaagccctgctggaacgtgcagaatcgttc
tgtaccgaccttggcatcaatctgaagggtgtggtgaacacgcccccggaaaaacgcctg
gaagcccttcaggaggctatgaacaccatcctcggcgagggcgagaacacgaccaaggcg
tacctgctgctggcgggtcaggttgcccgaaccttcaagtccatcctgcctgatgcggct
gccaacgcctatgcaccgatgtctgttctggtggcgtacctgggggcgatgatcaaggcc
ctgcgtccgcccccggacatctccgacgtgatgaacgatctggatgccttgctggatgat
tccatcgccaccgagggttaccgcatcggccacaagccagaagccgaggccctgatcgac
ctctcgcagatcgacttcgcagcccttcaggaaaagttcgccgagggcaagaaggctacc
gagactgagaagctcaaggggcagatcgaacagaagctggagaagatggtccgcgagaac
aaggggcgcactgatttcctggagaagttccagaagctgatcgatgcctacaactcgtca
agccacaacctcgaagccttcttcaaggaactgctagcctttgcccagaacctcaccgaa
gaggagcaacgggcgcaccgtgagaacctctccgaggaggaactggcaatcttcgacctg
ctgacccagccagaaccggcactgagcgagaaggagaaggacgaggtcaagaaggtcgcc
aaggaacttctcgccaagctgaaggccgagaagctggtcctcgactggaagctgaagacc
cagaccaaggccgatgtcgagcgcaccatccgggacttcttcatcaagctaccgtctgcc
tacaccccggcactcaagaaggacaagcgggtgaagacctatgcgcatgtctatgagaat
tatttcggggcagggcagagtgtctaccagcgtggtgccgcaggtgcccactga

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