Desulforapulum autotrophicum: HRM2_30600
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Entry
HRM2_30600 CDS
T00861
Symbol
groEL
Name
(GenBank) GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRM2_30600 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dat03019
]
HRM2_30600 (groEL)
03110 Chaperones and folding catalysts [BR:
dat03110
]
HRM2_30600 (groEL)
03029 Mitochondrial biogenesis [BR:
dat03029
]
HRM2_30600 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dat04147
]
HRM2_30600 (groEL)
Enzymes [BR:
dat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HRM2_30600 (groEL)
Messenger RNA biogenesis [BR:
dat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HRM2_30600 (groEL)
Chaperones and folding catalysts [BR:
dat03110
]
Heat shock proteins
HSP60 / Chaperonin
HRM2_30600 (groEL)
Mitochondrial biogenesis [BR:
dat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HRM2_30600 (groEL)
Exosome [BR:
dat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HRM2_30600 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HRM2_30600 (groEL)
Exosomal proteins of breast cancer cells
HRM2_30600 (groEL)
Exosomal proteins of colorectal cancer cells
HRM2_30600 (groEL)
Exosomal proteins of bladder cancer cells
HRM2_30600 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
ACN16143
UniProt:
C0QKQ3
LinkDB
All DBs
Position
complement(3474877..3476526)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKEIKYAAKAREAMLKGVQTLADAVVVTLGPKGRNVVIEKSWGSPLVTKDGVTVAKEID
LENKFENMGAQMVKEVSSKTSDMAGDGTTTATVLARAIYEEGQKLVVAGNNPMGIKRGID
LAVEKIIAELEAISKPTKDQKEIAQIGTISANSDETIGNIIAEAMGKVGKEGVITVEEAK
SMETTLDVVEGMQFDRGYLSPYFATNAEKMVAEMDNPYILICDKKISSMKDLLPVLEEVA
KLGKPLVIVAEDIEGEALATLVVNKIRGTLNVAAVKAPGFGDRRKAMLEDLAILTGGQVV
SEDVGLKLENVGVNDLGQAKSVVIDKDNTTIIDGAGARENLEGRVKMIRAQIDETSSDYD
REKLQERLAKLIGGVAVISVGAATETEMKEKKARVEDALNATRAAVEEGVVPGGGVALVR
CISLLAGLGESEEEKLGVKVVARAIEEPLRQIANNAGVEGSVVINAVKEGKGSFGYNART
NVYEDLIEAGVIDPKKVVRFALQNAASVASIMLTTEAMIADKPEEKDGGMPGGMPGGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaatcaaatatgctgcaaaagcccgtgaagcaatgctcaagggcgtacaa
acccttgcagatgcagttgttgtaacccttggacccaagggcagaaacgttgttatcgag
aaatcctggggatcgccccttgttacgaaagatggtgtgactgttgcaaaagagattgac
cttgagaataagtttgagaacatgggcgcccagatggtaaaagaggtgtcaagcaagaca
agtgacatggctggcgacggaaccaccactgcaactgttcttgcaagggccatctatgaa
gagggtcagaaacttgttgtggccggcaacaaccccatgggtatcaagaggggtatcgat
cttgctgtggaaaagattattgcagagctcgaggccatcagcaaacccaccaaggatcag
aaggaaattgcccagattggaaccatctcagccaacagtgatgagaccattggtaatatc
attgcagaggccatgggcaaggttggtaaagagggtgttatcaccgttgaagaggcaaaa
tcaatggagaccaccctggacgttgttgagggtatgcagtttgaccgcggttatctttct
ccctactttgcaaccaatgcagagaagatggttgccgagatggacaatccctatattctc
atctgcgacaagaaaatctccagcatgaaagatcttctcccggtgcttgaagaggttgcc
aagcttggcaaacccctggtcatcgtggctgaagacattgaaggcgaagcccttgccaca
ctggttgtgaacaagattcgcggcaccttgaacgttgcagctgtcaaggctcctggattc
ggcgatagaagaaaggcaatgcttgaagatcttgccatcctcacaggcggccaggttgtt
tccgaggatgtcggacttaagcttgaaaatgtaggcgtcaacgaccttggccaggccaag
tccgtagtgatcgacaaggacaacacaaccatcatcgacggtgccggtgccagggaaaat
cttgaaggcagggttaagatgatccgtgcccagatcgacgagacatcctctgattatgat
cgtgagaagctacaggagcgccttgcaaaactcatcggcggtgtagccgttatcagcgtg
ggtgctgcaaccgagactgagatgaaagagaaaaaggcaagggttgaggatgcactcaat
gcaacccgtgcagccgttgaggagggtgttgttcccggcggtggcgttgcccttgttcgc
tgtatctccctccttgccggccttggcgagagtgaagaggagaagcttggagttaaagtg
gttgccagggcaattgaagagccccttcgacagattgcaaacaatgcaggcgttgaaggt
tctgttgttatcaatgccgtaaaagaaggtaagggttcctttggttacaatgcaaggacc
aacgtgtatgaggatcttatcgaagctggtgttattgatcctaaaaaagttgttcgtttt
gcccttcagaatgcggcaagtgttgcatccatcatgctcaccactgaagccatgatcgct
gacaagcccgaagagaaagacggcggaatgcctggtggaatgcccggtggtggaatgggc
ggaatgggtggaatgggcggaatgatgtaa
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