Candidatus Desulforudis audaxviator: Daud_0818
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Entry
Daud_0818 CDS
T00655
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Daud_0818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_0818
Enzymes [BR:
dau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Daud_0818
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Daud_0818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_12
AAA_16
UvrD_C
AAA_22
nSTAND3
AAA
DEAD
Helicase_RecD
AAA_28
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ACA59333
UniProt:
B1I2W6
LinkDB
All DBs
Position
863295..865361
Genome browser
AA seq
688 aa
AA seq
DB search
MTETITDTVNRFIFKTETFAIFKLDNIVALGDVAGVREGDRLTVTGSWQEHPKYGRQLRV
EHWEKPVPSTEEAAADFLSSGLIKGVGPVLAERIVSVLGPNAVSAILEDPDVLKKVKGIG
KKAPEIRRQLQETYQVQQVVAELIRLGLTLKTAMKAYMKFGRPAAEYVRRNPYCLTELDL
IGFHRADDIARRAGLAPDSSFRVKAGILYVLNESLWDEGHAYLPRDELISRSLTLLNHVE
KSVSLDIVEKELSRLKGVHGSAEVSLAWAREYEEEIARDVKRLARQRFDVPPLPRDLIRG
IELTPDQNAAVKTALESGFSILTGGPGVGKTQTVRAVIRAFELQNPWGGVFLCAPTGRAA
RRLSEVTGRQAHTVHKLLGLRNGHADRNRKNPLECDLLILDEASMACLVLTKRLLEAVPN
NARILFVGDADQLPSVGPGNILRDLLDKVPTVRLTEIFRQAAESQIVTNAHRINRGQMPL
IDRSKTDFIFLEREDPEDIAKCVATCASGMGYDPLDVQVLSPMRKGPVGTAELNKLIQGG
MSGPRVKYGQYVFHVGDKVIHTKNNYDKGVFNGDIGIIKKIKMQHDVLVQYSSGLVSYSG
DDLRELEPAWAVTVHKAQGSEFKAVIIPVTTSHYVMLHRNLIYTAVTRAREKVILVGTKK
ALAIAVRNNKPIQRYTALSGLLRDAPRR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccatcaccgacaccgtaaaccggttcattttcaaaactgaaaccttcgcc
attttcaagcttgataacattgttgcgctgggcgatgtcgctggcgttcgcgagggcgac
cgcttgaccgttactggctcctggcaggagcatcctaaatacggcaggcagctcagagtc
gaacactgggagaaacccgtcccgtccaccgaagaagccgctgcagactttctttcttcc
ggcctgatcaagggcgtgggcccggtattggcagagcgaattgtgagcgttcttggtccc
aatgccgtgagtgcgattttggaagatccggacgtattgaagaaggtcaagggcatcggc
aaaaaagccccggaaattcgccgtcagcttcaggagacctatcaagtgcagcaggtcgta
gcagagctgatacggcttgggctcactttgaaaacggcgatgaaggcttacatgaaattc
ggccgcccggccgccgagtacgttcggagaaacccctactgcctgaccgaactggatctg
atcgggttccaccgggcggacgacattgcccggcgggccggcctggctccggattcttct
tttagagtcaaggccggaatactgtatgttttaaacgaatctctctgggacgagggtcat
gcctacctgcccagggatgagctcatttcccgctccctgaccttgttgaaccatgtcgaa
aaaagcgtgtcgctggacattgtggagaaagaactctcccgccttaaaggggttcacgga
agtgcggaagtctctctggcctgggccagggagtacgaagaagagatcgcccgggacgtg
aaaaggttggcccggcaacggttcgatgtaccgcctttgccccgggatctgatcaggggc
attgagctgacccctgaccagaatgcagcagttaagactgcgctggagagcggcttttct
atcttgaccggcggtcccggcgtgggcaagactcagactgtaagggcggtcatcagggcc
ttcgagttgcagaacccttgggggggagtatttctttgcgctcctacagggagagcagcc
agaaggctttcggaggtgaccgggcgccaggcgcacaccgtgcacaagcttctgggcctc
cggaacggccacgcagaccgcaaccgcaaaaacccgctggaatgcgatctgttgattttg
gacgaagcgagcatggcctgcttggttttgaccaagcgcctcctcgaagccgttcccaac
aacgccaggatccttttcgtcggagacgcggaccagcttccgagcgttggcccgggcaac
attttgcgcgatctgctggacaaagttccgactgtccgcctgaccgaaatctttcgccag
gctgccgagagccagatcgtaacgaacgctcaccggataaataggggccagatgccgctg
attgaccgctcgaagacggactttatattcctggaaagagaagatccggaagacatcgca
aagtgcgtggcgacttgcgcttccgggatgggttacgatcctttggacgtgcaggttctt
tcgccgatgcgaaagggcccggtggggacggctgagctcaataagctcatccaggggggg
atgtccggccccagggtgaaatacggccagtacgtcttccatgtgggcgacaaggtgatc
cacacgaagaacaactatgacaaaggggttttcaacggcgacatcgggattatcaagaag
atcaagatgcagcacgatgtcctggtgcagtacagcagcggcctggtttcctattccggg
gatgacctgagagagcttgagccggcgtgggcggtcacggttcacaaggctcagggctct
gagtttaaggctgtaataattcccgtcaccacctctcactatgtcatgctgcaccgcaac
ctgatctataccgccgtcaccagggccagggaaaaagtgattctggtgggcacgaagaag
gctttggccattgcggtgcgcaacaacaagccgattcagcgttacaccgcgctttcgggc
ctcctgagagacgcgccccgccgttaa
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